Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Intermediate filament protein, conserved site

Term: IPR018039  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene61907 SustainPine v3.0 257
AutoFact: Galactinol synthase n=3 Tax=Brassica napus RepID=B6ZBV9_BRANA 8.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Galactinol synthase 0.0
Putative N-terminus
sp_v3.0_unigene61982 SustainPine v3.0 305
AutoFact: RVT_2 domain containing protein 5.0e-06
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.828e-17
Internal
sp_v3.0_unigene61992 SustainPine v3.0 232
AutoFact: putative galactinol synthase [Pisum sativum] 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Galactinol synthase 0.0
Internal
sp_v3.0_unigene65388 SustainPine v3.0 255
AutoFact: Unassigned protein 2.0e-33
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Transposon protein, putative, unclassified 2.126e-07
Internal
sp_v3.0_unigene65613 SustainPine v3.0 323
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger protein, putative 1.512e-14
Internal
sp_v3.0_unigene66458 SustainPine v3.0 349
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 45 5.379e-09
Internal
sp_v3.0_unigene66746 SustainPine v3.0 223
AutoFact: Putative gag-pol polyprotein n=1 Tax=Citrus sinensis RepID=Q18L98_CITSI 4.0e-14
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.038e-10
Internal
sp_v3.0_unigene66881 SustainPine v3.0 388
AutoFact: Putative 9-cis-epoxycarotenoid dioxygenase n=9 Tax=Cupressaceae RepID=Q0EEH1_TAXDI 3.0e-22
FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Taxodium distichum (Bald cypress) (Cupressus disticha). 0.0
Sma3: Putative 9-cis-epoxycarotenoid dioxygenase 2.865e-19
C-terminus
sp_v3.0_unigene68265 SustainPine v3.0 227
AutoFact: DEAD-box ATP-dependent RNA helicase 42 n=3 Tax=Arabidopsis RepID=RH42_ARATH 2.0e-11
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 42; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 45 9.358e-09
Internal
sp_v3.0_unigene70014 SustainPine v3.0 411
AutoFact: putative galactinol synthase [Pisum sativum] 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Galactinol synthase 0.0
Internal
sp_v3.0_unigene72561 SustainPine v3.0 242
AutoFact: DEAD-box ATP-dependent RNA helicase 42 n=3 Tax=Arabidopsis RepID=RH42_ARATH 6.0e-12
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 42; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 42 4.107e-09
Internal
sp_v3.0_unigene72854 SustainPine v3.0 285
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 8.0e-22
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.4013e-45
Internal
sp_v3.0_unigene75820 SustainPine v3.0 335
AutoFact: putative GDSL-motif lipase/hydrolase [Arabidopsis thaliana] 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger protein, putative 4.755e-15
Internal
sp_v3.0_unigene76764 SustainPine v3.0 279
AutoFact: Pre-mRNA-processing ATP-dependent RNA helicase PRP5 n=1 Tax=Gibberella zeae PH-1 RepID=PRP5_GIBZE 3.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 2.754e-12
Internal
sp_v3.0_unigene77840 SustainPine v3.0 349
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Transposon protein, putative, unclassified 2.994e-09
Putative C-terminus
sp_v3.0_unigene79260 SustainPine v3.0 275
AutoFact: Galactinol synthase n=1 Tax=Coffea arabica RepID=E0X627_COFAR 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Galactinol synthase 0.0
Internal
sp_v3.0_unigene80111 SustainPine v3.0 125
AutoFact: Pre-mRNA-processing ATP-dependent RNA helicase PRP5 n=2 Tax=Agaricales RepID=A8NXX3_COPC7 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene93598 SustainPine v3.0 1481
AutoFact: transcription elongation regulator 1 [Arabidopsis thaliana] dbj|BAB01298.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76298.1| transcription elongation regulator 1 [Arabidopsis thaliana] 3.9937e-43
FL-Next: sp=Pre-mRNA-processing protein 40C; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene93723 SustainPine v3.0 893
AutoFact: transcription elongation regulator 1 [Arabidopsis thaliana] dbj|BAB01298.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76298.1| transcription elongation regulator 1 [Arabidopsis thaliana] 3.0e-34
FL-Next: sp=Pre-mRNA-processing protein 40C; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene94184 SustainPine v3.0 1178
AutoFact: GDSL-motif lipase/hydrolase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger protein, putative 2.582e-14
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain