Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Intermediate filament protein, conserved site

Term: IPR018039  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene18024 SustainPine v3.0 1372
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SSI9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger protein, putative 8.965e-18
Complete
sp_v3.0_unigene18322 SustainPine v3.0 1352
AutoFact: Galactinol synthase n=1 Tax=Coffea arabica RepID=E0X627_COFAR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Galactinol synthase 0.0
Complete
sp_v3.0_unigene18382 SustainPine v3.0 589
AutoFact: Galactinol synthase n=3 Tax=Brassica napus RepID=B6ZBV9_BRANA 6.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Galactinol synthase 0.0
C-terminus
sp_v3.0_unigene18420 SustainPine v3.0 1263
AutoFact: Galactinol synthase n=3 Tax=Brassica napus RepID=B6ZBV9_BRANA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Galactinol synthase 0.0
Complete
sp_v3.0_unigene20701 SustainPine v3.0 1632
AutoFact: DEAD-box ATP-dependent RNA helicase 37 [Arabidopsis thaliana] sp|Q84W89.2|RH37_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 37 gb|AAD23001.1| putative ATP-dependent RNA helicase [Arabidopsis thaliana] gb|AEC10133.1| DEAD-box ATP-dependent RNA h 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 2.676e-24
C-terminus
sp_v3.0_unigene20938 SustainPine v3.0 662
AutoFact: Galactinol synthase n=3 Tax=Brassica napus RepID=B6ZBV9_BRANA 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Galactinol synthase 0.0
C-terminus
sp_v3.0_unigene21817 SustainPine v3.0 1203
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SYX7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger protein, putative 2.139e-22
Complete
sp_v3.0_unigene22838 SustainPine v3.0 1341
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SN62_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger protein, putative 9.422e-17
Complete
sp_v3.0_unigene23914 SustainPine v3.0 2102
AutoFact: DEAD-box ATP-dependent RNA helicase 5 n=2 Tax=Oryza sativa RepID=RH5_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 2.49e-22
Complete
sp_v3.0_unigene24103 SustainPine v3.0 581
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_1.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=E0CQA8_VITVI 4.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Anther-specific proline-rich protein APG 2.5e-17
N-terminus
sp_v3.0_unigene27685 SustainPine v3.0 903
AutoFact: Galactinol synthase n=3 Tax=Brassica napus RepID=B6ZBV9_BRANA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Galactinol synthase 0.0
C-terminus
sp_v3.0_unigene31055 SustainPine v3.0 578
AutoFact: Galactinol synthase n=3 Tax=Brassica napus RepID=B6ZBV9_BRANA 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Galactinol synthase 0.0
C-terminus
sp_v3.0_unigene31619 SustainPine v3.0 540
AutoFact: Putative carotenoid cleavage dioxygenase n=1 Tax=Chrysanthemum x morifolium RepID=A0JBX7_CHRMO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Carotenoid cleavage dioxygenase 4 8.321e-13
C-terminus
sp_v3.0_unigene31644 SustainPine v3.0 507
AutoFact: putative GDSL-motif lipase/hydrolase [Arabidopsis thaliana] 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger protein, putative 7.982e-33
N-terminus
sp_v3.0_unigene32067 SustainPine v3.0 529
AutoFact: Galactinol synthase n=3 Tax=Brassica napus RepID=B6ZBV9_BRANA 8.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Galactinol synthase 0.0
C-terminus
sp_v3.0_unigene34227 SustainPine v3.0 836
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 45 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 6.13e-08
Internal
sp_v3.0_unigene34267 SustainPine v3.0 2896
AutoFact: ubiquitin-like-specific protease ESD4 [Arabidopsis thaliana] sp|Q94F30.1|ESD4_ARATH RecName: Full=Ubiquitin-like-specific protease ESD4; AltName: Full=Protein EARLY IN SHORT DAYS 4; Short=AtESD4 gb|AAK62379.1|AF386934_1 Unknown protein [Arabidopsis thalia 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SUMO protease 2.976e-13
Complete
sp_v3.0_unigene35157 SustainPine v3.0 527
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene35667 SustainPine v3.0 1033
AutoFact: DEAD-box ATP-dependent RNA helicase 37 n=2 Tax=Oryza sativa Japonica Group RepID=RH37_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 2.076e-30
Internal
sp_v3.0_unigene38724 SustainPine v3.0 2148
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.7e-24
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain