Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Intermediate filament protein, conserved site

Term: IPR018039  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene559 SustainPine v3.0 1527
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SSI9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger protein, putative 5.22e-20
Complete
sp_v3.0_unigene681 SustainPine v3.0 1639
AutoFact: RVT_2 domain containing protein 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 8.754e-19
C-terminus
sp_v3.0_unigene2391 SustainPine v3.0 2584
AutoFact: DEAD box protein P68 [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 7.893e-21
Complete
sp_v3.0_unigene2763 SustainPine v3.0 2135
AutoFact: DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana] sp|Q9SQV1.1|RH40_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 40 gb|AAF08584.1|AC011623_17 putative RNA helicase [Arabidopsis thaliana] gb|AEE74400.1| DEAD-box ATP-dependent RNA heli 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 5.401e-22
C-terminus
sp_v3.0_unigene2830 SustainPine v3.0 1429
AutoFact: Galactinol synthase n=1 Tax=Coffea arabica RepID=E0X627_COFAR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Galactinol synthase 0.0
Complete
sp_v3.0_unigene3871 SustainPine v3.0 3218
AutoFact: transcription elongation regulator 1 [Arabidopsis thaliana] dbj|BAB01298.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76298.1| transcription elongation regulator 1 [Arabidopsis thaliana] 0.0
FL-Next: sp=Pre-mRNA-processing protein 40C; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene4368 SustainPine v3.0 796
AutoFact: Galactinol synthase n=1 Tax=Coptis japonica RepID=B0I373_COPJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Galactinol synthase 0.0
N-terminus
sp_v3.0_unigene4564 SustainPine v3.0 425
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger protein, putative 1.379e-22
N-terminus
sp_v3.0_unigene4670 SustainPine v3.0 831
AutoFact: Carotenoid cleavage dioxygenase 4a n=1 Tax=Citrus clementina RepID=A0SE35_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative 9-cis-epoxycarotenoid dioxygenase 2.733e-22
Putative N-terminus
sp_v3.0_unigene6704 SustainPine v3.0 2494
AutoFact: DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana] sp|Q9SQV1.1|RH40_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 40 gb|AAF08584.1|AC011623_17 putative RNA helicase [Arabidopsis thaliana] gb|AEE74400.1| DEAD-box ATP-dependent RNA heli 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 1.075e-24
C-terminus
sp_v3.0_unigene8279 SustainPine v3.0 2746
AutoFact: DEAD box protein P68 [Pisum sativum] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 2.8e-18
Complete
sp_v3.0_unigene9051 SustainPine v3.0 1392
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 45 2.29e-08
C-terminus
sp_v3.0_unigene9798 SustainPine v3.0 2421
AutoFact: Fyve finger-containing phosphoinositide kinase, fyv1, putative n=1 Tax=Ricinus communis RepID=B9T3Y2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fyve finger-containing phosphoinositide kinase, fyv1, putative 9.927e-12
Putative Complete
sp_v3.0_unigene10308 SustainPine v3.0 321
AutoFact: 1-phosphatidylinositol-3-phosphate 5-kinase-like [Oryza sativa Japonica Group] 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fyve finger-containing phosphoinositide kinase, fyv1, putative 7.861e-12
Internal
sp_v3.0_unigene11015 SustainPine v3.0 1045
AutoFact: Carotenoid 9,10(9',10')-cleavage dioxygenase n=1 Tax=Crocus sativus RepID=CCD_CROSA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Carotenoid cleavage dioxygenase 1 2.018e-37
C-terminus
sp_v3.0_unigene11558 SustainPine v3.0 857
AutoFact: 1-phosphatidylinositol-3-phosphate 5-kinase [Arabidopsis thaliana] dbj|BAE99133.1| hypothetical protein [Arabidopsis thaliana] gb|AEE86194.1| 1-phosphatidylinositol-3-phosphate 5-kinase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fyve finger-containing phosphoinositide kinase, fyv1, putative 8.514e-12
C-terminus
sp_v3.0_unigene13626 SustainPine v3.0 413
AutoFact: DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana] sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24 gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana] gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 1.663e-20
Internal
sp_v3.0_unigene14818 SustainPine v3.0 1598
AutoFact: Putative 9-cis-epoxycarotenoid dioxygenase n=9 Tax=Cupressaceae RepID=Q0EEH1_TAXDI 0.0
FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Taxodium distichum (Bald cypress) (Cupressus disticha). 0.0
Sma3: 9-cis-epoxycarotenoid dioxygenase 3.005e-40
N-terminus
sp_v3.0_unigene17364 SustainPine v3.0 1293
AutoFact: Galactinol synthase n=1 Tax=Coptis japonica RepID=B0I373_COPJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Galactinol synthase 0.0
Complete
sp_v3.0_unigene17908 SustainPine v3.0 1340
AutoFact: putative GDSL-motif lipase/hydrolase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger protein, putative 9.061e-22
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain