Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: XS domain

Term: IPR005380  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene502 SustainPine v3.0 3224
AutoFact: XS domain containing protein 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene10055 SustainPine v3.0 1979
AutoFact: XS domain containing protein 2.0e-12
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Chromosome chr13 scaffold_74, whole genome shotgun sequence 8.749e-07
Putative Complete
sp_v3.0_unigene14065 SustainPine v3.0 888
AutoFact: Protein SUPPRESSOR OF GENE SILENCING 3 n=1 Tax=Solanum lycopersicum RepID=SGS3_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein SUPPRESSOR OF GENE SILENCING 3 2.694e-09
Putative C-terminus
sp_v3.0_unigene28079 SustainPine v3.0 1247
AutoFact: putative transcription factor [Zea mays] gb|AAM22636.1|AF434193_1 X1 [Zea mays] gb|ACL53618.1| unknown [Zea mays] gb|ACN27531.1| unknown [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene28467 SustainPine v3.0 643
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Sma3: Chromosome chr13 scaffold_74, whole genome shotgun sequence 9.762e-07
Internal
sp_v3.0_unigene35026 SustainPine v3.0 1261
AutoFact: XH/XS domain-containing protein [Arabidopsis thaliana] gb|AAF18488.1|AC010924_1 Contains similarity to gb|AF136530 transcriptional regulator from Zea mays. ESTs gb|F14071, gb|Z26823, gb|AI998935 come from this gene [Arabidopsis thaliana] gb|AEE29382.1| XH 0.0
FL-Next: tr=Putative transcription factor X1; Oryza sativa subsp. japonica (Rice). 0.0
C-terminus
sp_v3.0_unigene35063 SustainPine v3.0 640
AutoFact: Protein SUPPRESSOR OF GENE SILENCING 3 homolog n=2 Tax=Oryza sativa RepID=SGS3_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein SUPPRESSOR OF GENE SILENCING 3 2.694e-09
Internal
sp_v3.0_unigene44431 SustainPine v3.0 1178
AutoFact: Protein SUPPRESSOR OF GENE SILENCING 3 homolog n=2 Tax=Oryza sativa RepID=SGS3_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein SUPPRESSOR OF GENE SILENCING 3 2.953e-09
Putative C-terminus
sp_v3.0_unigene48998 SustainPine v3.0 292
AutoFact: Suppressor of gene silencing 3 protein (Fragment) n=1 Tax=Picea abies RepID=B2KZJ3_PICAB 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein SUPPRESSOR OF GENE SILENCING 3 1.616e-09
Internal
sp_v3.0_unigene49084 SustainPine v3.0 260
AutoFact: rgd1, SGS3, lbl1; ragged seedling1 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein SUPPRESSOR OF GENE SILENCING 3 1.656e-09
Internal
sp_v3.0_unigene93573 SustainPine v3.0 2338
AutoFact: Protein SUPPRESSOR OF GENE SILENCING 3 n=1 Tax=Solanum lycopersicum RepID=SGS3_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein SUPPRESSOR OF GENE SILENCING 3 3.06e-09
Putative Complete
sp_v3.0_unigene93626 SustainPine v3.0 2379
AutoFact: protein SUPPRESSOR OF GENE SILENCING 3 homolog [Zea mays] sp|A1Y2B7.1|SGS3_MAIZE RecName: Full=Protein SUPPRESSOR OF GENE SILENCING 3 homolog; AltName: Full=Protein LEAFBLADELESS 1; AltName: Full=ZmSGS3 gb|ABH10613.1| leafbladeless1 [Zea mays] gb|ACN33294 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein SUPPRESSOR OF GENE SILENCING 3 3.006e-09
Putative Complete
sp_v3.0_unigene126110 SustainPine v3.0 217
AutoFact: rgd1, SGS3, lbl1; ragged seedling1 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein SUPPRESSOR OF GENE SILENCING 3 2.258e-09
Internal
sp_v3.0_unigene184121 SustainPine v3.0 501
AutoFact: rgd1, SGS3, lbl1; ragged seedling1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein SUPPRESSOR OF GENE SILENCING 3 2.953e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain