Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: SMCs flexible hinge

Term: IPR010935  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene490 SustainPine v3.0 2865
AutoFact: structural maintenance of chromosomes 1 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene2051 SustainPine v3.0 4296
AutoFact: pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_51, whole genome shotgun sequence 4.581e-08
Complete
sp_v3.0_unigene5813 SustainPine v3.0 1075
AutoFact: pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SMC3 protein 4.107e-09
N-terminus
sp_v3.0_unigene7237 SustainPine v3.0 2151
AutoFact: SMC_N multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SMC3 protein 3.564e-09
Putative Complete
sp_v3.0_unigene9429 SustainPine v3.0 844
AutoFact: SMC_hinge multi-domain protein 2.0e-19
FL-Next: sp=MAR-binding filament-like protein 1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Sma3: SMC3 protein 1.945e-09
Internal
sp_v3.0_unigene11164 SustainPine v3.0 1495
AutoFact: putative SMC protein [Oryza sativa Japonica Group] gb|EEC79459.1| hypothetical protein OsI_20467 [Oryza sativa Indica Group] gb|EEE64226.1| hypothetical protein OsJ_19059 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Structural maintenance of chromosomes protein 4 1.736e-09
Internal
sp_v3.0_unigene12183 SustainPine v3.0 1484
AutoFact: structural maintenance of chromosomes (SMC) - like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Condensin complex component 1.047e-07
N-terminus
sp_v3.0_unigene12633 SustainPine v3.0 4218
AutoFact: putative SMC protein [Oryza sativa Japonica Group] gb|EEC79459.1| hypothetical protein OsI_20467 [Oryza sativa Indica Group] gb|EEE64226.1| hypothetical protein OsJ_19059 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Structural maintenance of chromosomes protein 4 2.544e-09
Complete
sp_v3.0_unigene37484 SustainPine v3.0 716
AutoFact: Cast multi-domain protein 2.0e-06
FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene41207 SustainPine v3.0 367
AutoFact: Structural maintenance of chromosomes protein 4 n=2 Tax=Arabidopsis thaliana RepID=SMC4_ARATH 7.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Structural maintenance of chromosomes protein 4 2.304e-09
C-terminus
sp_v3.0_unigene52594 SustainPine v3.0 231
AutoFact: Unassigned protein
FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene57032 SustainPine v3.0 374
AutoFact: PREDICTED: similar to leucine zipper protein, partial [Strongylocentrotus purpuratus] ref|XP_001189267.1| PREDICTED: similar to leucine zipper protein, partial [Strongylocentrotus purpuratus] 4.0e-06
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: SMC3 protein 7.054e-10
Internal
sp_v3.0_unigene57206 SustainPine v3.0 185
AutoFact: putative SMC protein [Oryza sativa Japonica Group] gb|EEC79459.1| hypothetical protein OsI_20467 [Oryza sativa Indica Group] gb|EEE64226.1| hypothetical protein OsJ_19059 [Oryza sativa Japonica Group] 2.0e-22
FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Structural maintenance of chromosomes protein 4 2.848e-09
Internal
sp_v3.0_unigene60882 SustainPine v3.0 213
AutoFact: Unassigned protein
FL-Next: tr=Structural maintenance of chromosome, putative; Ricinus communis (Castor bean). 0.0
Sma3: SMC3 protein 1.05e-09
Internal
sp_v3.0_unigene61569 SustainPine v3.0 325
AutoFact: Unassigned protein
FL-Next: sp=Structural maintenance of chromosomes protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene72476 SustainPine v3.0 284
AutoFact: putative SMC protein [Oryza sativa Japonica Group] gb|EEC79459.1| hypothetical protein OsI_20467 [Oryza sativa Indica Group] gb|EEE64226.1| hypothetical protein OsJ_19059 [Oryza sativa Japonica Group] 7.0e-18
FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene79173 SustainPine v3.0 231
AutoFact: Structural maintenance of chromosomes protein 4 n=2 Tax=Arabidopsis thaliana RepID=SMC4_ARATH 7.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Structural maintenance of chromosomes protein 4 2.745e-09
Internal
sp_v3.0_unigene98805 SustainPine v3.0 473
AutoFact: OmpH multi-domain protein 3.0e-05
FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene127991 SustainPine v3.0 1226
AutoFact: Phosphoglycerate kinase n=1 Tax=Picea sitchensis RepID=B8LKQ1_PICSI 0.0
FL-Next: sp=Phosphoglycerate kinase; Pinus pinaster (Maritime pine). 0.0
Sma3: Phosphoglycerate kinase 0.0
Putative C-terminus
sp_v3.0_unigene149117 SustainPine v3.0 237
AutoFact: Structural maintenance of chromosomes protein 4 n=2 Tax=Arabidopsis thaliana RepID=SMC4_ARATH 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain