Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: SMCs flexible hinge

Term: IPR010935  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene151726 SustainPine v3.0 352
AutoFact: Structural maintenance of chromosomes protein 1A n=1 Tax=Ascaris suum RepID=F1KRD4_ASCSU 2.0e-24
FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene151980 SustainPine v3.0 274
AutoFact: Structural maintenance of chromosomes 1-like 1 (Fragment) n=2 Tax=Microtus RepID=D5KWP1_MICAR 2.0e-27
FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Condensin complex component 8.716e-08
N-terminus
sp_v3.0_unigene153318 SustainPine v3.0 508
AutoFact: Structural maintenance of chromosomes protein 3 n=50 Tax=Euteleostomi RepID=SMC3_HUMAN 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SMC3 protein 3.168e-09
N-terminus
sp_v3.0_unigene154721 SustainPine v3.0 336
AutoFact: Structural maintenance of chromosomes protein 4, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NXB1_PHYIT 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Structural maintenance of chromosomes protein 4 2.304e-09
Putative C-terminus
sp_v3.0_unigene156029 SustainPine v3.0 449
AutoFact: Cohesin complex subunit psm1 n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NBC9_COPC7 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Condensin complex component 4.636e-08
Internal
sp_v3.0_unigene159067 SustainPine v3.0 370
AutoFact: PREDICTED: structural maintenance of chromosomes protein 3 [Apis mellifera] 5.0e-14
FL-Next: tr=Condensin complex component SMC3; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene159556 SustainPine v3.0 435
AutoFact: structural maintenance of chromosomes protein 2-2 [Arabidopsis thaliana] sp|Q9SN90.1|SMC22_ARATH RecName: Full=Structural maintenance of chromosomes protein 2-2; Short=AtSMC2-2; AltName: Full=Chromosome-associated protein E-2; Short=AtCAP-E2 emb|CAB61972. 1.0e-24
FL-Next: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Condensin complex components subunit 4.493e-08
Internal
sp_v3.0_unigene161646 SustainPine v3.0 311
AutoFact: putative SMC protein [Oryza sativa Japonica Group] gb|EEC79459.1| hypothetical protein OsI_20467 [Oryza sativa Indica Group] gb|EEE64226.1| hypothetical protein OsJ_19059 [Oryza sativa Japonica Group] 1.4013e-45
FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Structural maintenance of chromosomes protein 4 2.694e-09
Internal
sp_v3.0_unigene162294 SustainPine v3.0 281
AutoFact: Structural maintenance of chromosomes protein 4 n=2 Tax=Arabidopsis thaliana RepID=SMC4_ARATH 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Structural maintenance of chromosomes protein 4 2.495e-09
Internal
sp_v3.0_unigene163278 SustainPine v3.0 113
AutoFact: Unassigned protein
FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SMC4 protein 8.772e-06
Internal
sp_v3.0_unigene167813 SustainPine v3.0 123
AutoFact: Putative SMC protein (ISS) (Fragment) n=1 Tax=Ostreococcus tauri RepID=Q017K9_OSTTA 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Structural maintenance of chromosomes protein 4 2.304e-09
Internal
sp_v3.0_unigene184357 SustainPine v3.0 635
AutoFact: Structural maintenance of chromosomes 1 protein n=1 Tax=Arabidopsis thaliana RepID=Q6Q1P4_ARATH 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene208319 SustainPine v3.0 481
AutoFact: Structural maintenance of chromosomes (SMC)-like protein n=2 Tax=Arabidopsis RepID=Q9M1T3_ARATH 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Condensin complex component 5.689e-08
Internal
sp_v3.0_unigene210146 SustainPine v3.0 709
AutoFact: structural maintenance of chromosomes (SMC) - like protein [Arabidopsis thaliana] 3.0e-18
FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Condensin complex component 9.494e-08
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain