Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA ligase, ATP-dependent, central

Term: IPR012310  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene430 SustainPine v3.0 2856
AutoFact: DNA ligase n=5 Tax=Poaceae RepID=Q7XD67_ORYSJ 0.0
FL-Next: Isoform 3 of DNA ligase 1 OS=Arabidopsis thaliana GN=LIG1 0.0
Sma3: DNA ligase 2.014e-40
C-terminus
sp_v3.0_unigene1776 SustainPine v3.0 3224
AutoFact: mRNA capping enzyme-like protein [Arabidopsis thaliana] gb|AEE74723.1| mRNA capping enzyme-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: mRNA capping enzyme, putative 1.113e-08
Complete
sp_v3.0_unigene9566 SustainPine v3.0 636
AutoFact: DNA ligase (Fragment) n=2 Tax=Vitis vinifera RepID=D7SQI2_VITVI 0.0
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA ligase 6.943e-10
Internal
sp_v3.0_unigene12123 SustainPine v3.0 1476
AutoFact: DNA ligase n=5 Tax=Poaceae RepID=Q7XD67_ORYSJ 0.0
FL-Next: Isoform 3 of DNA ligase 1 OS=Arabidopsis thaliana GN=LIG1 0.0
Sma3: DNA ligase 0.0
C-terminus
sp_v3.0_unigene18876 SustainPine v3.0 1538
AutoFact: DNA ligase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TSX4_VITVI 0.0
FL-Next: Isoform 3 of DNA ligase 1 OS=Arabidopsis thaliana GN=LIG1 0.0
Sma3: DNA ligase 1.20512e-43
C-terminus
sp_v3.0_unigene38938 SustainPine v3.0 545
AutoFact: DNA ligase n=1 Tax=Populus nigra RepID=Q0PCF8_POPNI 0.0
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA ligase 7.815e-10
Internal
sp_v3.0_unigene41771 SustainPine v3.0 869
AutoFact: DNA ligase n=1 Tax=Oryza sativa RepID=Q01KE4_ORYSA 0.0
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA ligase 6.707e-10
Internal
sp_v3.0_unigene45112 SustainPine v3.0 596
AutoFact: DNA ligase n=1 Tax=Oryza sativa RepID=Q01KE4_ORYSA 0.0
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA ligase 6.707e-10
Internal
sp_v3.0_unigene49946 SustainPine v3.0 278
AutoFact: DNA ligase (Fragment) n=2 Tax=Vitis vinifera RepID=D7SQI2_VITVI 2.0e-13
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene51208 SustainPine v3.0 343
AutoFact: DNA ligase 4 n=2 Tax=Arabidopsis RepID=DNLI4_ARATH 4.99997e-41
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA ligase 6.707e-10
Internal
sp_v3.0_unigene53275 SustainPine v3.0 229
AutoFact: DNA ligase n=1 Tax=Populus nigra RepID=Q0PCF8_POPNI 6.0e-31
FL-Next: sp=Putative DNA ligase 4; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA ligase 6.707e-10
Internal
sp_v3.0_unigene59230 SustainPine v3.0 207
AutoFact: DNA ligase n=2 Tax=Selaginella moellendorffii RepID=D8RMH0_SELML 6.0e-12
FL-Next: Isoform 3 of DNA ligase 1 OS=Arabidopsis thaliana GN=LIG1 0.0
Sma3: DNA ligase 5.95e-14
Internal
sp_v3.0_unigene62061 SustainPine v3.0 240
AutoFact: DNA ligase 4 n=2 Tax=Arabidopsis RepID=DNLI4_ARATH 3.0e-28
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA ligase 5.004e-10
Internal
sp_v3.0_unigene62444 SustainPine v3.0 248
AutoFact: DNA ligase n=1 Tax=Populus trichocarpa RepID=B9IN68_POPTR 2.0e-08
FL-Next: sp=Putative DNA ligase 4; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA ligase 6.707e-10
Internal
sp_v3.0_unigene64037 SustainPine v3.0 244
AutoFact: DNA ligase n=2 Tax=Selaginella moellendorffii RepID=D8SJP8_SELML 4.0e-28
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA ligase 6.707e-10
Internal
sp_v3.0_unigene64884 SustainPine v3.0 151
AutoFact: DNA ligase (Fragment) n=2 Tax=Vitis vinifera RepID=D7SQI2_VITVI 5.0e-11
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA ligase 5.912e-07
Internal
sp_v3.0_unigene71861 SustainPine v3.0 295
AutoFact: DNA ligase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TSX4_VITVI 2.0e-28
FL-Next: Isoform 3 of DNA ligase 1 OS=Arabidopsis thaliana GN=LIG1 0.0
Internal
sp_v3.0_unigene80380 SustainPine v3.0 187
AutoFact: ATP synthase gamma chain (Fragment) n=1 Tax=Ixodes scapularis RepID=B7QJZ7_IXOSC 5.0e-17
FL-Next: sp=ATP synthase gamma chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP synthase gamma chain 0.0
C-terminus
sp_v3.0_unigene80496 SustainPine v3.0 263
AutoFact: DNA ligase n=1 Tax=Oryza sativa RepID=Q01KE4_ORYSA 3.0e-15
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA ligase 2.851e-07
Internal
sp_v3.0_unigene81638 SustainPine v3.0 142
AutoFact: DNA ligase n=1 Tax=Oryza sativa RepID=Q01KE4_ORYSA 3.0e-15
FL-Next: sp=Putative DNA ligase 4; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA ligase 7.815e-10
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain