Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: FAR1 DNA binding domain

Term: IPR004330  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene420 SustainPine v3.0 1227
AutoFact: Malic enzyme n=1 Tax=Picea sitchensis RepID=B8LMR7_PICSI 0.0
FL-Next: sp=Malic enzyme; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Malic enzyme 6.16571e-44
C-terminus
sp_v3.0_unigene1033 SustainPine v3.0 2441
AutoFact: Pleckstrin homology (PH) domain-containing protein [Arabidopsis thaliana] gb|AAL50066.1| At2g30880/F7F1.9 [Arabidopsis thaliana] gb|AAN28904.1| At2g30880/F7F1.9 [Arabidopsis thaliana] gb|AEC08451.1| Pleckstrin homology (PH) domain-containing protein [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: PH domain containing protein 3.006e-09
Complete
sp_v3.0_unigene2366 SustainPine v3.0 2086
AutoFact: Calmodulin binding protein, putative n=1 Tax=Ricinus communis RepID=B9T1E0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calmodulin binding protein, putative 1.323e-17
Complete
sp_v3.0_unigene2697 SustainPine v3.0 1498
AutoFact: Calmodulin binding protein, putative n=1 Tax=Ricinus communis RepID=B9T1E0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calmodulin binding protein 5.365e-07
C-terminus
sp_v3.0_unigene5556 SustainPine v3.0 1477
AutoFact: C2H2-like zinc finger protein [Arabidopsis thaliana] gb|AAL36315.1| unknown protein [Arabidopsis thaliana] gb|AAM61245.1| zinc finger-like protein [Arabidopsis thaliana] gb|AAM91787.1| unknown protein [Arabidopsis thaliana] gb|AED97727.1| C2H2-like zinc f 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleic acid binding protein, putative 8.884e-06
Complete
sp_v3.0_unigene5577 SustainPine v3.0 1380
AutoFact: ABC transporter G family member 22 [Arabidopsis thaliana] ref|NP_850781.2| ABC transporter G family member 22 [Arabidopsis thaliana] sp|Q93YS4.1|AB22G_ARATH RecName: Full=ABC transporter G family member 22; Short=ABC transporter ABCG.22; Short=AtABCG22; A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: White-brown-complex ABC transporter family 2.144e-27
C-terminus
sp_v3.0_unigene7567 SustainPine v3.0 1297
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene8186 SustainPine v3.0 1785
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene10329 SustainPine v3.0 2520
AutoFact: Malic enzyme n=1 Tax=Picea sitchensis RepID=B8LMR7_PICSI 0.0
FL-Next: sp=Malic enzyme; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Malic enzyme 0.0
Complete
sp_v3.0_unigene17766 SustainPine v3.0 836
AutoFact: ribose-5-phosphate isomerase A [Trichodesmium erythraeum IMS101] sp|Q111U2.1|RPIA_TRIEI RecName: Full=Ribose-5-phosphate isomerase A; AltName: Full=Phosphoriboisomerase A; Short=PRI gb|ABG51732.1| ribose-5-phosphate isomerase [Trichodesmium erythraeum IMS 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene18118 SustainPine v3.0 1897
AutoFact: Malic enzyme n=1 Tax=Picea sitchensis RepID=B8LMR7_PICSI 0.0
FL-Next: sp=Malic enzyme; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Malic enzyme 0.0
C-terminus
sp_v3.0_unigene22625 SustainPine v3.0 1027
AutoFact: Ripening-related protein grip22 n=2 Tax=Vitis vinifera RepID=GRI22_VITVI 0.0
FL-Next: sp=Ripening-related protein grip22; Vitis vinifera (Grape). 0.0
Sma3: Kiwellin, putative 2.734e-33
Complete
sp_v3.0_unigene24578 SustainPine v3.0 447
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago truncatula RepID=A2Q2C7_MEDTR 7.0e-40
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.873e-17
C-terminus
sp_v3.0_unigene30864 SustainPine v3.0 839
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene31448 SustainPine v3.0 479
AutoFact: uncharacterized protein [Arabidopsis thaliana] ref|NP_001078120.1| uncharacterized protein [Arabidopsis thaliana] gb|AAK43852.1|AF370475_1 Unknown protein [Arabidopsis thaliana] gb|AAM10258.1| unknown protein [Arabidopsis thaliana] gb|AEE74551.1| uncharac 6.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene37421 SustainPine v3.0 1022
AutoFact: putative potasium transporter [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium transporter 3.459e-21
Complete
sp_v3.0_unigene37681 SustainPine v3.0 1056
AutoFact: HAK4 putative potassium transporter [Physcomitrella patens] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium transporter, putative 1.03696e-43
N-terminus
sp_v3.0_unigene40391 SustainPine v3.0 380
AutoFact: Malic enzyme n=1 Tax=Picea sitchensis RepID=B8LMR7_PICSI 0.0
FL-Next: sp=Malic enzyme; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Malic enzyme 0.0
Internal
sp_v3.0_unigene42494 SustainPine v3.0 766
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 0.0
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Polyprotein 1.477e-24
Putative Complete
sp_v3.0_unigene42502 SustainPine v3.0 788
AutoFact: Zinc finger protein n=3 Tax=Andropogoneae RepID=B6STE4_MAIZE 3.9937e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleic acid binding protein, putative 8.884e-06
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain