Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: FAR1 DNA binding domain

Term: IPR004330  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene96174 SustainPine v3.0 842
AutoFact: Pol protein (Fragment) n=2 Tax=Picea abies RepID=Q9M6P0_PICAB 0.0
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Polyprotein 4.883e-15
C-terminus
sp_v3.0_unigene97217 SustainPine v3.0 1394
AutoFact: putative potasium transporter [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium transporter 1.345e-20
Complete
sp_v3.0_unigene99412 SustainPine v3.0 754
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene105435 SustainPine v3.0 568
AutoFact: Gag/pol polyprotein n=3 Tax=Pisum sativum RepID=Q6WAY3_PEA 0.0
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.708e-19
Putative Complete
sp_v3.0_unigene112001 SustainPine v3.0 275
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene113446 SustainPine v3.0 395
AutoFact: OSJNBa0053B21.11 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XKR0_ORYSJ 4.0e-31
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.896e-14
Putative Complete
sp_v3.0_unigene127321 SustainPine v3.0 1154
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene138541 SustainPine v3.0 349
AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 7.0e-26
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.271e-14
Putative C-terminus
sp_v3.0_unigene142000 SustainPine v3.0 372
AutoFact: adh_short domain containing protein 3.0e-07
Sma3: Short chain alcohol dehydrogenase, putative 1.604e-25
putative_coding
sp_v3.0_unigene142034 SustainPine v3.0 483
AutoFact: Malic enzyme n=3 Tax=Malpighiales RepID=B9GPX3_POPTR 3.0e-21
FL-Next: sp=Malic enzyme; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Malic enzyme 2.531e-26
Putative C-terminus
sp_v3.0_unigene143696 SustainPine v3.0 384
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 4.00001e-40
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Putative polyprotein 1.864e-22
Putative C-terminus
sp_v3.0_unigene145011 SustainPine v3.0 472
AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene153553 SustainPine v3.0 304
AutoFact: PREDICTED: similar to TNP2 n=1 Tax=Vitis vinifera RepID=UPI00019854B7 9.0e-31
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Transposon protein, putative, CACTA, En/Spm sub-class 1.826e-38
Internal
sp_v3.0_unigene159931 SustainPine v3.0 503
AutoFact: putative beta-glucosidase [Oryza sativa Japonica Group] gb|AAV32242.1| putative beta-glucosidase [Oryza sativa Japonica Group] 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-glucosidase, putative 0.0
Putative Complete
sp_v3.0_unigene160671 SustainPine v3.0 150
AutoFact: FAR1; Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago truncatula RepID=Q2HRZ3_MEDTR 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene161256 SustainPine v3.0 488
AutoFact: Unassigned protein
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Polyprotein 1.524e-13
C-terminus
sp_v3.0_unigene161497 SustainPine v3.0 247
AutoFact: Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max RepID=B5U9F7_SOYBN 2.0e-35
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Transposon protein, putative, unclassified 7.069e-08
Internal
sp_v3.0_unigene161510 SustainPine v3.0 482
AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 2.8026e-45
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.467e-17
C-terminus
sp_v3.0_unigene163412 SustainPine v3.0 200
AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 2.0e-17
FL-Next: tr=Putative retroelement protein; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene182980 SustainPine v3.0 717
AutoFact: calmodulin-binding protein [Beta vulgaris] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calmodulin binding protein, putative 1.323e-17
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain