Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L29, conserved site

Term: IPR018254  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene110606 SustainPine v3.0 235
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Auxin-induced protein 5NG4, putative 1.669e-13
N-terminus
sp_v3.0_unigene111118 SustainPine v3.0 514
• AutoFact: EamA domain containing protein 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nodulin-like protein 1.081e-18
N-terminus
sp_v3.0_unigene125376 SustainPine v3.0 196
• AutoFact: phosphoinositide 4-kinase gamma 7 [Arabidopsis thaliana] gb|AAL06989.1| At2g03890/T18C20.9 [Arabidopsis thaliana] gb|AAD24822.2| expressed protein [Arabidopsis thaliana] gb|AAO11612.1| At2g03890/T18C20.9 [Arabidopsis thaliana] gb|AEC05763.1| phosphoinosit 3.0e-24
• FL-Next: sp=Probable phosphatidylinositol 4-kinase type 2-beta At1g26270; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Phosphatidylinositol 3-and 4-kinase family protein 4.142e-08
Internal
sp_v3.0_unigene127389 SustainPine v3.0 986
• AutoFact: Superoxide dismutase [Cu-Zn] n=3 Tax=Pinaceae RepID=SODC_PINSY 0.0
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
Complete
sp_v3.0_unigene127467 SustainPine v3.0 874
• AutoFact: Superoxide dismutase [Cu-Zn] n=3 Tax=Pinaceae RepID=SODC_PINSY 0.0
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
Complete
sp_v3.0_unigene127553 SustainPine v3.0 967
• AutoFact: Pseudotzain n=3 Tax=Pinaceae RepID=Q40922_PSEMZ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cysteine proteinase 0.0
N-terminus
sp_v3.0_unigene127875 SustainPine v3.0 1570
• AutoFact: Pseudotzain n=3 Tax=Pinaceae RepID=Q40922_PSEMZ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cysteine proteinase 0.0
C-terminus
sp_v3.0_unigene128293 SustainPine v3.0 590
• AutoFact: Vignain n=3 Tax=Zea mays RepID=B6TLR1_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cysteine proteinase 0.0
Putative C-terminus
sp_v3.0_unigene131253 SustainPine v3.0 420
• AutoFact: Nodulin-like protein n=2 Tax=Zea mays RepID=B6TRP3_MAIZE 4.00001e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nodulin-like protein 1.562e-13
Internal
sp_v3.0_unigene135686 SustainPine v3.0 422
• AutoFact: Nodulin-like protein n=1 Tax=Zea mays RepID=B6TZY7_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nodulin-like protein 2.684e-19
N-terminus
sp_v3.0_unigene140481 SustainPine v3.0 514
• AutoFact: Superoxide dismutase [Cu-Zn] n=3 Tax=Pinaceae RepID=SODC_PINSY 0.0
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
Putative Complete
sp_v3.0_unigene140484 SustainPine v3.0 568
• AutoFact: Superoxide dismutase [Cu-Zn] n=3 Tax=Pinaceae RepID=SODC_PINSY 0.0
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
Putative Complete
sp_v3.0_unigene141077 SustainPine v3.0 609
• AutoFact: Cysteine proteinase C1A n=1 Tax=Dactylis glomerata RepID=D0VEB8_DACGL 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cysteine proteinase 4.881e-21
N-terminus
sp_v3.0_unigene141849 SustainPine v3.0 342
• AutoFact: Nodulin-like protein (Fragment) n=1 Tax=Plantago major RepID=Q5ZFS7_PLAMJ 8.99999e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nodulin-like protein 1.43e-21
Putative N-terminus
sp_v3.0_unigene142336 SustainPine v3.0 786
• AutoFact: similar to 60S ribosomal protein L35 [Solanum lycopersicum] 8.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L35 2.107e-18
Misassembled
sp_v3.0_unigene142521 SustainPine v3.0 525
• AutoFact: Superoxide dismutase [Cu-Zn] n=3 Tax=Pinaceae RepID=SODC_PINSY 0.0
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
N-terminus
sp_v3.0_unigene142850 SustainPine v3.0 499
• AutoFact: Predicted protein n=4 Tax=Hordeum vulgare RepID=F2EHF9_HORVD 4.2039e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cysteine proteinase 0.0
C-terminus
sp_v3.0_unigene143045 SustainPine v3.0 282
• AutoFact: Superoxide dismutase [Cu-Zn] n=3 Tax=Pinaceae RepID=SODC_PINSY 5.0e-23
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
N-terminus
sp_v3.0_unigene143397 SustainPine v3.0 510
• AutoFact: Superoxide dismutase [Cu-Zn] n=3 Tax=Pinaceae RepID=SODC_PINSY 0.0
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
Putative Complete
sp_v3.0_unigene143436 SustainPine v3.0 364
• AutoFact: CuZn-superoxide dismutase 3 n=2 Tax=Haberlea rhodopensis RepID=F1CYZ2_9LAMI 1.0e-21
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain