Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: HAS subgroup

Term: IPR013999  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene102819 SustainPine v3.0 888
AutoFact: Helicase, putative n=1 Tax=Ricinus communis RepID=B9SBN6_RICCO 0.0
FL-Next: sp=Probable chromatin-remodeling complex ATPase chain; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 5.596e-09
Internal
sp_v3.0_unigene104491 SustainPine v3.0 491
AutoFact: Transcription-coupled repair protein CSB/RAD26 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SCT4_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 family DNA-dependent ATPase 3.928e-26
Internal
sp_v3.0_unigene107228 SustainPine v3.0 232
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S516_RICCO 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K7P8 1.214e-08
Internal
sp_v3.0_unigene107806 SustainPine v3.0 277
AutoFact: PREDICTED: similar to PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1); ATP binding / DNA binding / helicase n=1 Tax=Vitis vinifera RepID=UPI0001983E18 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 3.006e-09
Internal
sp_v3.0_unigene107941 SustainPine v3.0 305
AutoFact: SNF2 family DNA-dependent ATPase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TJL1_PHYPA 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 4.143e-17
Internal
sp_v3.0_unigene107997 SustainPine v3.0 196
AutoFact: SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2Y8_PHYPA 1.0e-30
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 6.042e-09
Internal
sp_v3.0_unigene110889 SustainPine v3.0 348
AutoFact: DNA helicase INO80 complex-like 1 n=1 Tax=Arabidopsis thaliana RepID=F4J277_ARATH 0.0
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromatin remodeling complex subunit 9.252e-19
Internal
sp_v3.0_unigene113955 SustainPine v3.0 275
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S516_RICCO 5.0e-29
FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Sma3: Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K7P8 1.945e-08
Internal
sp_v3.0_unigene133034 SustainPine v3.0 465
AutoFact: DNA helicase INO80 complex-like 1 [Arabidopsis thaliana] sp|Q8RXS6.2|INO80_ARATH RecName: Full=DNA helicase INO80; Short=AtINO80; AltName: Full=Putative DNA helicase INO80 complex homolog 1 gb|AEE79637.1| DNA helicase INO80 complex-like 1 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 1.062e-24
Internal
sp_v3.0_unigene148935 SustainPine v3.0 301
AutoFact: SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2Y8_PHYPA 1.0e-10
FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene167491 SustainPine v3.0 122
AutoFact: Helicase, putative n=1 Tax=Ricinus communis RepID=B9SBN6_RICCO 3.0e-09
FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 1.463e-09
Internal
sp_v3.0_unigene167549 SustainPine v3.0 261
AutoFact: SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2Y8_PHYPA 2.99878e-43
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 6.505e-09
Internal
sp_v3.0_unigene199563 SustainPine v3.0 292
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9GF82_POPTR 4.0e-21
FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain