Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: HMG-I/HMG-Y, DNA-binding, conserved site

Term: IPR000637  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene103607 SustainPine v3.0 446
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Sma3: Putative uncharacterized protein OSJNBa0075N02.126 5.848e-06
Internal
sp_v3.0_unigene110889 SustainPine v3.0 348
AutoFact: DNA helicase INO80 complex-like 1 n=1 Tax=Arabidopsis thaliana RepID=F4J277_ARATH 0.0
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromatin remodeling complex subunit 9.252e-19
Internal
sp_v3.0_unigene113724 SustainPine v3.0 190
AutoFact: putative chromatin remodeling protein SYD [Arabidopsis thaliana] 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene128632 SustainPine v3.0 279
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 1.0e-08
FL-Next: sp=Protease Do-like 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene130976 SustainPine v3.0 281
AutoFact: DNA-3-methyladenine glycosylase, putative n=1 Tax=Ricinus communis RepID=B9S6F5_RICCO 8.0e-27
FL-Next: tr=DNA-3-methyladenine glycosylase, putative; Ricinus communis (Castor bean). 0.0
Sma3: DNA-3-methyladenine glycosylase, putative 9.494e-08
Putative C-terminus
sp_v3.0_unigene142333 SustainPine v3.0 1592
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine endopeptidase degp2, putative 8.939e-20
Putative Complete
sp_v3.0_unigene143404 SustainPine v3.0 287
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 2.0e-30
FL-Next: sp=Protease Do-like 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Serine endopeptidase degp2, putative 1.966e-16
Internal
sp_v3.0_unigene166748 SustainPine v3.0 366
AutoFact: Homeobox protein HAT3.1, putative n=1 Tax=Ricinus communis RepID=B9SN98_RICCO 8.0e-32
FL-Next: sp=Homeobox protein HAT3.1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pathogenesis-related homeodomain protein 1.514e-08
Internal
sp_v3.0_unigene166823 SustainPine v3.0 335
AutoFact: Pathogenesis-related homeodomain protein [Arabidopsis thaliana] sp|P48785.1|PRH_ARATH RecName: Full=Pathogenesis-related homeodomain protein; Short=PRHA gb|AAA32843.1| homeodomain protein [Arabidopsis thaliana] gb|AAC49836.1| PRHA [Arabidopsis thaliana] e 5.99756e-43
FL-Next: sp=Pathogenesis-related homeodomain protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pathogenesis-related homeodomain protein 2.217e-08
Internal
sp_v3.0_unigene183377 SustainPine v3.0 594
AutoFact: putative chromatin remodeling protein SYD [Arabidopsis thaliana] 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene185158 SustainPine v3.0 578
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 2.0e-09
FL-Next: sp=Protease Do-like 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Serine endopeptidase degp2, putative 1.616e-08
C-terminus
sp_v3.0_unigene208703 SustainPine v3.0 323
AutoFact: PHD domain containing protein 2.0e-10
FL-Next: sp=Homeobox protein HOX1A; Zea mays (Maize). 0.0
Sma3: Pathogenesis-related homeodomain protein 1.514e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain