Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Bromodomain

Term: IPR001487  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene120572 SustainPine v3.0 284
AutoFact: Bromodomain n=1 Tax=Medicago truncatula RepID=Q1SKV9_MEDTR 1.0e-23
FL-Next: tr=Bromodomain; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Bromodomain-containing protein, putative 8.946e-08
Internal
sp_v3.0_unigene121133 SustainPine v3.0 176
AutoFact: methyl-CPG-binding domain 9 [Arabidopsis thaliana] sp|Q9SGH2.1|MBD9_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 9; Short=AtMBD9; Short=MBD09; AltName: Full=Histone acetyl tranferase MBD9; AltName: Full=Methyl-CpG-binding protein MBD9 4.0e-06
FL-Next: sp=Methyl-CpG-binding domain-containing protein 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene123505 SustainPine v3.0 323
AutoFact: RecName: Full=Transcription initiation factor TFIID subunit 1; AltName: Full=TAFII250 dbj|BAD37451.1| putative HAC13 protein [Oryza sativa Japonica Group] dbj|BAD37604.1| putative HAC13 protein [Oryza sativa Japonica Group] 1.0e-27
FL-Next: sp=Transcription initiation factor TFIID subunit 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Transcription initiation factor TFIID, subunit TAF1 4.688e-09
Internal
sp_v3.0_unigene125390 SustainPine v3.0 273
AutoFact: Transcription initiation factor TFIID subunit 1 n=5 Tax=Oryza sativa RepID=TAF1_ORYSJ 3.0e-28
FL-Next: sp=Transcription initiation factor TFIID subunit 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Transcription initiation factor TFIID, subunit TAF1 4.823e-09
Internal
sp_v3.0_unigene126123 SustainPine v3.0 359
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9T479_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division cycle protein 48 homolog 3.149e-11
Internal
sp_v3.0_unigene126918 SustainPine v3.0 390
AutoFact: Bromodomain protein n=2 Tax=Populus trichocarpa RepID=B9HH62_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bromodomain protein 1.086e-09
Internal
sp_v3.0_unigene129379 SustainPine v3.0 385
AutoFact: Bromodomain protein with a AAA ATPase domain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SIK6_PHYPA 0.0
FL-Next: sp=ATPase family AAA domain-containing protein At1g05910; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Bromodomain-containing protein 6.332e-07
Internal
sp_v3.0_unigene129841 SustainPine v3.0 303
AutoFact: Single bromodomain-containing protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T0X0_PHYPA 2.0e-19
FL-Next: Isoform 2 of Transcription factor GTE10 OS=Arabidopsis thaliana GN=GTE10 0.0
Sma3: Bromodomain protein 1.543e-08
Internal
sp_v3.0_unigene130967 SustainPine v3.0 283
AutoFact: histone acetyltransferase HAC12 [Arabidopsis thaliana] sp|Q9FWQ5.2|HAC12_ARATH RecName: Full=Histone acetyltransferase HAC12 gb|AEE29487.1| histone acetyltransferase HAC12 [Arabidopsis thaliana] 1.4013e-45
FL-Next: sp=Histone acetyltransferase HAC12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Histone acetyltransferase 1.12e-13
Internal
sp_v3.0_unigene131474 SustainPine v3.0 196
unknown
sp_v3.0_unigene131638 SustainPine v3.0 491
AutoFact: [R] COG2319 FOG: WD40 repeat 3.0e-05
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative WD-40 repeat protein 6.911e-07
Internal
sp_v3.0_unigene133034 SustainPine v3.0 465
AutoFact: DNA helicase INO80 complex-like 1 [Arabidopsis thaliana] sp|Q8RXS6.2|INO80_ARATH RecName: Full=DNA helicase INO80; Short=AtINO80; AltName: Full=Putative DNA helicase INO80 complex homolog 1 gb|AEE79637.1| DNA helicase INO80 complex-like 1 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 1.062e-24
Internal
sp_v3.0_unigene149963 SustainPine v3.0 243
AutoFact: Bromodomain-containing protein n=1 Tax=Ricinus communis RepID=B9R8P3_RICCO 4.0e-14
FL-Next: tr=Bromodomain-containing protein; Ricinus communis (Castor bean). 0.0
Sma3: Bromodomain-containing protein 1.061e-10
Internal
sp_v3.0_unigene157054 SustainPine v3.0 260
AutoFact: Single bromodomain-containing protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SZX2_PHYPA 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene161550 SustainPine v3.0 388
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: WD-repeat protein, putative 8.476e-06
Internal
sp_v3.0_unigene161610 SustainPine v3.0 271
AutoFact: methyl-CPG-binding domain 9 [Arabidopsis thaliana] sp|Q9SGH2.1|MBD9_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 9; Short=AtMBD9; Short=MBD09; AltName: Full=Histone acetyl tranferase MBD9; AltName: Full=Methyl-CpG-binding protein MBD9 2.0e-08
FL-Next: sp=Methyl-CpG-binding domain-containing protein 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene161880 SustainPine v3.0 375
AutoFact: Similarity to 26S proteasome subunit 4 n=2 Tax=Arabidopsis thaliana RepID=Q9LIM2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bromodomain protein 2.082e-08
Internal
sp_v3.0_unigene165558 SustainPine v3.0 302
AutoFact: Single bromodomain-containing protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T0X0_PHYPA 2.0e-19
FL-Next: Isoform 2 of Transcription factor GTE10 OS=Arabidopsis thaliana GN=GTE10 0.0
Sma3: Bromodomain protein 1.543e-08
Internal
sp_v3.0_unigene166652 SustainPine v3.0 211
AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 6.0e-35
FL-Next: sp=Probable histone acetyltransferase HAC-like 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Histone acetyltransferase 1.202e-13
Internal
sp_v3.0_unigene183636 SustainPine v3.0 635
AutoFact: Protein kinase [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_278, whole genome shotgun sequence 2.285e-15
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain