Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Bromodomain

Term: IPR001487  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene100102 SustainPine v3.0 682
AutoFact: pfam05110, AF-4, AF-4 proto-oncoprotein 6.0e-05
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Bromodomain-containing RNA-binding protein 1 1.746e-09
Internal
sp_v3.0_unigene100438 SustainPine v3.0 590
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SH81_RICCO 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene100949 SustainPine v3.0 513
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RZN7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative WD-40 repeat protein 9.314e-07
Internal
sp_v3.0_unigene101852 SustainPine v3.0 507
AutoFact: bromodomain and extraterminal domain protein 10 [Arabidopsis thaliana] sp|Q93ZB7.1|GTE11_ARATH RecName: Full=Transcription factor GTE11; AltName: Full=BROMODOMAIN AND EXTRATERMINAL DOMAIN PROTEIN 10; Short=AtBET10; AltName: Full=Bromodomain-containing pro 4.0e-12
FL-Next: sp=Transcription factor GTE10; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Global transcription factor group 3.299e-11
Internal
sp_v3.0_unigene102773 SustainPine v3.0 562
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTY5_RICCO 0.0
FL-Next: sp=Probable chromatin-remodeling complex ATPase chain; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: SWI2/SNF2-like protein 1.397e-14
Internal
sp_v3.0_unigene102790 SustainPine v3.0 364
AutoFact: Bromodomain protein n=2 Tax=Populus trichocarpa RepID=B9MY25_POPTR 7.00649e-45
FL-Next: sp=ATPase family AAA domain-containing protein At1g05910; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Bromodomain-containing protein 6.332e-07
Internal
sp_v3.0_unigene103992 SustainPine v3.0 320
AutoFact: Bromodomain protein n=1 Tax=Populus trichocarpa RepID=B9MZ00_POPTR 4.0e-20
FL-Next: sp=Transcription factor GTE11; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Bromodomain protein 7.054e-21
Internal
sp_v3.0_unigene104491 SustainPine v3.0 491
AutoFact: Transcription-coupled repair protein CSB/RAD26 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SCT4_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 family DNA-dependent ATPase 3.928e-26
Internal
sp_v3.0_unigene104522 SustainPine v3.0 253
AutoFact: Transcription initiation factor TFIID, subunit TAF1 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TKZ9_PHYPA 5.0e-31
FL-Next: sp=Transcription initiation factor TFIID subunit 1-A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Transcription initiation factor TFIID, subunit TAF1 4.688e-09
Internal
sp_v3.0_unigene104592 SustainPine v3.0 687
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SH81_RICCO 1.0e-19
FL-Next: sp=Methyl-CpG-binding domain-containing protein 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene104941 SustainPine v3.0 297
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RZN7_RICCO 1.0e-09
FL-Next: tr=WD-repeat protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene106263 SustainPine v3.0 281
AutoFact: transcription initiation factor TFIID subunit 1-A [Arabidopsis thaliana] sp|Q8LRK9.1|TAF1A_ARATH RecName: Full=Transcription initiation factor TFIID subunit 1-A; Short=AtTAF1a; AltName: Full=TAFII250-A gb|AAM34782.1|AF510669_1 HAF1 [Arabidopsis thaliana] 3.0e-13
FL-Next: sp=Transcription initiation factor TFIID subunit 1-A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Transcription initiation factor TFIID, subunit TAF1 2.826e-10
Internal
sp_v3.0_unigene106450 SustainPine v3.0 484
AutoFact: Bromodomain protein n=1 Tax=Populus trichocarpa RepID=B9GQ03_POPTR 8.99999e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bromodomain-containing protein 6.044e-17
Putative C-terminus
sp_v3.0_unigene106731 SustainPine v3.0 167
AutoFact: ATP binding protein, putative (EC:3.6.4.3) 2.0e-15
FL-Next: sp=ATPase family AAA domain-containing protein At1g05910; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Bromodomain protein 4.831e-07
Internal
sp_v3.0_unigene108832 SustainPine v3.0 693
AutoFact: Transcription initiation factor tfiid, putative n=1 Tax=Ricinus communis RepID=B9S9F7_RICCO 6.0e-15
FL-Next: sp=Transcription initiation factor TFIID subunit 1-A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Histone acetyltransferase 1.512e-06
N-terminus
sp_v3.0_unigene110161 SustainPine v3.0 351
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SH81_RICCO 1.0e-39
FL-Next: sp=Methyl-CpG-binding domain-containing protein 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene110889 SustainPine v3.0 348
AutoFact: DNA helicase INO80 complex-like 1 n=1 Tax=Arabidopsis thaliana RepID=F4J277_ARATH 0.0
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromatin remodeling complex subunit 9.252e-19
Internal
sp_v3.0_unigene115823 SustainPine v3.0 217
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9T479_RICCO 5.0e-12
FL-Next: sp=ATPase family AAA domain-containing protein At1g05910; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene116317 SustainPine v3.0 239
AutoFact: Global transcription factor group (Fragment) n=1 Tax=Populus trichocarpa RepID=B9GMZ4_POPTR 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Global transcription factor group 2.226e-11
Internal
sp_v3.0_unigene119610 SustainPine v3.0 530
AutoFact: p300/CBP acetyltransferase-related protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TAD6_PHYPA 0.0
FL-Next: sp=Probable histone acetyltransferase HAC-like 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Histone acetyltransferase 1.497e-13
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain