Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Bromodomain

Term: IPR001487  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene73703 SustainPine v3.0 470
AutoFact: RecName: Full=Helicase SWR1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 2.257e-38
Internal
sp_v3.0_unigene74105 SustainPine v3.0 381
AutoFact: DNA-binding bromodomain-containing protein [Arabidopsis thaliana] ref|NP_001119438.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana] gb|AAL66979.1| unknown protein [Arabidopsis thaliana] gb|AAM20271.1| unknown protein [Arabidopsis thali 7.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene74278 SustainPine v3.0 294
AutoFact: RecName: Full=Cysteine-rich receptor-like protein kinase 1; Short=Cysteine-rich RLK1; AltName: Full=Receptor-like kinase in flowers 2; Flags: Precursor 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein tyrosine kinase, putative 2.371e-09
Internal
sp_v3.0_unigene75807 SustainPine v3.0 375
AutoFact: cysteine-rich receptor-like protein kinase 2 [Arabidopsis thaliana] sp|Q9CAL3.1|CRK2_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 2; Short=Cysteine-rich RLK2; Flags: Precursor gb|AAG52471.1|AC010796_10 putative protein kinase; 37247-3480 5.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_278, whole genome shotgun sequence 4.022e-15
Internal
sp_v3.0_unigene76263 SustainPine v3.0 260
AutoFact: Similarity to 26S proteasome subunit 4 n=2 Tax=Arabidopsis thaliana RepID=Q9LIM2_ARATH 4.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bromodomain-containing protein 1.959e-06
Internal
sp_v3.0_unigene76590 SustainPine v3.0 395
AutoFact: DNA-binding bromodomain-containing protein [Arabidopsis thaliana] ref|NP_001119438.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana] gb|AAL66979.1| unknown protein [Arabidopsis thaliana] gb|AAM20271.1| unknown protein [Arabidopsis thali 2.0e-10
FL-Next: tr=Os09g0550000 protein; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Bromodomain protein 3.664e-08
Internal
sp_v3.0_unigene76619 SustainPine v3.0 321
AutoFact: RAD26-like SNF2 family DNA-dependent ATPase n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D7Q2_LACBS 1.0e-24
FL-Next: tr=GAGA-binding transcriptional activator; Pinus taeda (Loblolly pine). 0.0
Sma3: SNF2 super family 3.206e-32
Putative C-terminus
sp_v3.0_unigene77014 SustainPine v3.0 216
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] gb|AEE75622.1| AAA-type ATPase family protein [Arabidopsis thaliana] 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bromodomain protein 1.238e-09
Internal
sp_v3.0_unigene78119 SustainPine v3.0 292
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9T479_RICCO 4.0e-15
FL-Next: sp=ATPase family AAA domain-containing protein At1g05910; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Bromodomain protein 1.399e-10
Internal
sp_v3.0_unigene79431 SustainPine v3.0 196
AutoFact: Bromodomain protein n=2 Tax=Populus trichocarpa RepID=B9HH62_POPTR 4.0e-17
FL-Next: sp=ATPase family AAA domain-containing protein At1g05910; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Bromodomain protein 1.902e-10
Internal
sp_v3.0_unigene79508 SustainPine v3.0 310
AutoFact: Histone acetyltransferase gcn5, putative n=1 Tax=Ricinus communis RepID=B9S4R6_RICCO 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone acetyltransferase GCN5 4.361e-09
Internal
sp_v3.0_unigene84039 SustainPine v3.0 212
coding
sp_v3.0_unigene93612 SustainPine v3.0 1821
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HEW0_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 9.648e-28
Putative Complete
sp_v3.0_unigene94190 SustainPine v3.0 473
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9T479_RICCO 1.0e-38
FL-Next: sp=ATPase family AAA domain-containing protein At1g05910; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Bromodomain protein 1.399e-10
Internal
sp_v3.0_unigene95009 SustainPine v3.0 1773
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9GQA7_POPTR 0.0
FL-Next: sp=ATP-dependent helicase BRM; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene95881 SustainPine v3.0 833
AutoFact: TT_ORF1 multi-domain protein 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene96864 SustainPine v3.0 1708
AutoFact: Chloroplast bromodomain-containing protein (Fragment) n=1 Tax=Pachysandra terminalis RepID=A1XX44_9MAGN 2.0e-16
FL-Next: sp=Transcription factor GTE7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Global transcription factor group 3.151e-14
C-terminus
sp_v3.0_unigene97146 SustainPine v3.0 448
AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 6.346e-17
Internal
sp_v3.0_unigene97639 SustainPine v3.0 204
AutoFact: Histone acetyltransferase gcn5, putative n=1 Tax=Ricinus communis RepID=B9S4R6_RICCO 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone acetyltransferase 6.086e-10
Internal
sp_v3.0_unigene98626 SustainPine v3.0 452
AutoFact: Unassigned protein 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain