Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Bromodomain

Term: IPR001487  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene8552 SustainPine v3.0 1600
AutoFact: Histone acetyltransferase gcn5, putative n=1 Tax=Ricinus communis RepID=B9S4R6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone acetyltransferase 9.128e-19
C-terminus
sp_v3.0_unigene8567 SustainPine v3.0 467
AutoFact: transcription factor GTE6 [Arabidopsis thaliana] sp|Q9FT54.1|GTE6_ARATH RecName: Full=Transcription factor GTE6; AltName: Full=Bromodomain-containing protein GTE6; AltName: Full=Protein GENERAL TRANSCRIPTION FACTOR GROUP E6; AltName: Full=Protein GLOBAL T 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene8714 SustainPine v3.0 1309
AutoFact: calmodulin-binding protein [Arabidopsis thaliana] gb|AAF28348.1| calmodulin-binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AAA ATPase, central region 3.222e-07
C-terminus
sp_v3.0_unigene9064 SustainPine v3.0 642
AutoFact: histon acetyltransferase HAT1 [Arabidopsis thaliana] 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone acetyltransferase 1.549e-09
C-terminus
sp_v3.0_unigene10574 SustainPine v3.0 354
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RZN7_RICCO 7.00649e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative WD-40 repeat protein 8.709e-07
Internal
sp_v3.0_unigene14179 SustainPine v3.0 740
AutoFact: RecName: Full=Cysteine-rich receptor-like protein kinase 8; Short=Cysteine-rich RLK8; Flags: Precursor 9.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein tyrosine kinase, putative 2.816e-10
C-terminus
sp_v3.0_unigene14455 SustainPine v3.0 480
AutoFact: Methyl-CpG-binding domain-containing protein 9 n=2 Tax=Arabidopsis RepID=MBD9_ARATH 9.99967e-42
FL-Next: sp=Methyl-CpG-binding domain-containing protein 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene14687 SustainPine v3.0 518
AutoFact: Bromodomain-containing protein n=1 Tax=Ricinus communis RepID=B9S4L0_RICCO 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bromodomain protein 1.516e-13
Internal
sp_v3.0_unigene15102 SustainPine v3.0 1473
AutoFact: WD-40 repeat protein-like [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Putative WD-40 repeat protein 4.182e-07
C-terminus
sp_v3.0_unigene15652 SustainPine v3.0 550
AutoFact: p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana] 0.0
FL-Next: Isoform 2 of Histone acetyltransferase HAC1 OS=Arabidopsis thaliana GN=HAC1 0.0
Sma3: Histone acetyltransferase 8.981e-14
Internal
sp_v3.0_unigene16051 SustainPine v3.0 3042
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division cycle protein 48 7.867e-13
Complete
sp_v3.0_unigene20094 SustainPine v3.0 3331
AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SGL2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Global transcription factor group 1.014e-17
Complete
sp_v3.0_unigene24817 SustainPine v3.0 1648
AutoFact: [BK] COG5076 Transcription factor involved in chromatin remodeling, contains bromodomain 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bromodomain-containing protein, putative 7.124e-26
Putative Complete
sp_v3.0_unigene28647 SustainPine v3.0 972
AutoFact: transcription initiation factor TFIID subunit 1-A [Arabidopsis thaliana] sp|Q8LRK9.1|TAF1A_ARATH RecName: Full=Transcription initiation factor TFIID subunit 1-A; Short=AtTAF1a; AltName: Full=TAFII250-A gb|AAM34782.1|AF510669_1 HAF1 [Arabidopsis thaliana] 6.02558e-44
FL-Next: sp=Transcription initiation factor TFIID subunit 1-A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Transcription initiation factor TFIID, subunit TAF1 4.823e-09
C-terminus
sp_v3.0_unigene29272 SustainPine v3.0 729
AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 1.359e-29
Putative C-terminus
sp_v3.0_unigene30822 SustainPine v3.0 1123
AutoFact: Bromodomain protein n=1 Tax=Populus trichocarpa RepID=B9HPS5_POPTR 1.0e-22
FL-Next: tr=Bromodomain protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene34465 SustainPine v3.0 1794
AutoFact: SEC1 family transport protein SLY1 [Arabidopsis thaliana] sp|Q9SL48.1|SLY1_ARATH RecName: Full=SEC1 family transport protein SLY1; Short=AtSLY1 gb|AAD20128.1| putative SEC1 family transport protein [Arabidopsis thaliana] gb|AAK91430.1| At2g17980/T27K22.15 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SEC1 family transport protein SLY1 1.902e-09
C-terminus
sp_v3.0_unigene35303 SustainPine v3.0 2610
AutoFact: Bromodomain-containing protein n=1 Tax=Ricinus communis RepID=B9SV90_RICCO 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene40178 SustainPine v3.0 381
AutoFact: RecName: Full=Transcription initiation factor TFIID subunit 1; AltName: Full=TAFII250 dbj|BAD37451.1| putative HAC13 protein [Oryza sativa Japonica Group] dbj|BAD37604.1| putative HAC13 protein [Oryza sativa Japonica Group] 2.0e-39
FL-Next: sp=Transcription initiation factor TFIID subunit 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Transcription initiation factor TFIID, subunit TAF1 4.688e-09
Internal
sp_v3.0_unigene41867 SustainPine v3.0 236
AutoFact: histone acetyltransferase HAC12 [Arabidopsis thaliana] sp|Q9FWQ5.2|HAC12_ARATH RecName: Full=Histone acetyltransferase HAC12 gb|AEE29487.1| histone acetyltransferase HAC12 [Arabidopsis thaliana] 3.0e-36
FL-Next: sp=Histone acetyltransferase HAC12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Histone acetyltransferase 1.12e-13
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain