Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Pseudouridine synthase I, TruA

Term: IPR001406  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene245 SustainPine v3.0 1743
• AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Yth domain-containing protein, putative 4.285e-27
Putative C-terminus
sp_v3.0_unigene321 SustainPine v3.0 2895
• AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: YT521-B-like family protein, expressed 4.162e-11
Complete
sp_v3.0_unigene3495 SustainPine v3.0 2667
• AutoFact: tRNA pseudouridine synthase family protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCD2_CUCME 0.0
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pseudouridylate synthase 3.099e-12
Putative Complete
sp_v3.0_unigene4149 SustainPine v3.0 543
• AutoFact: Pseudouridine synthase n=1 Tax=Ricinus communis RepID=B9RVG5_RICCO 1.99993e-41
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pseudouridylate synthase 2.528e-06
Putative C-terminus
sp_v3.0_unigene7136 SustainPine v3.0 2147
• AutoFact: tRNA pseudouridine synthase family protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCD2_CUCME 0.0
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pseudouridylate synthase 3.099e-12
C-terminus
sp_v3.0_unigene15089 SustainPine v3.0 1425
• AutoFact: Pseudouridine synthase (Fragment) n=2 Tax=Vitis vinifera RepID=D7T696_VITVI 0.0
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pseudouridylate synthase 1.624e-22
Putative Complete
sp_v3.0_unigene15509 SustainPine v3.0 1672
• AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AE97_PICSI 0.0
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pseudouridylate synthase 6.152e-23
Complete
sp_v3.0_unigene19257 SustainPine v3.0 3377
• AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Yth domain-containing protein, putative 2.106e-07
Complete
sp_v3.0_unigene27105 SustainPine v3.0 550
• AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AA47_PICSI 0.0
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pseudouridylate synthase 1.608e-16
C-terminus
sp_v3.0_unigene29167 SustainPine v3.0 2249
• AutoFact: Pseudouridine synthase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TFS0_VITVI 0.0
• FL-Next: sp=Pseudouridine synthase; Vitis vinifera (Grape). 0.0
• Sma3: Pseudouridylate synthase 1.486e-25
Putative Complete
sp_v3.0_unigene43090 SustainPine v3.0 591
• AutoFact: PREDICTED: similar to zinc finger (C3HC4-type RING finger) family protein n=1 Tax=Vitis vinifera RepID=UPI0001982E83 9.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 8.156e-17
Internal
sp_v3.0_unigene46173 SustainPine v3.0 482
• AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AA47_PICSI 0.0
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pseudouridylate synthase 1.905e-16
C-terminus
sp_v3.0_unigene47341 SustainPine v3.0 216
• AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AA47_PICSI 6.0e-28
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pseudouridylate synthase 2.436e-13
Internal
sp_v3.0_unigene60046 SustainPine v3.0 367
• AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AE97_PICSI 4.0e-33
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pseudouridylate synthase 5.7e-26
C-terminus
sp_v3.0_unigene62581 SustainPine v3.0 347
• AutoFact: Pseudouridine synthase (Fragment) n=1 Tax=Vitis vinifera RepID=D7SJM4_VITVI 4.0e-22
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pseudouridylate synthase 2.183e-06
Putative C-terminus
sp_v3.0_unigene63007 SustainPine v3.0 112
• AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AE97_PICSI 6.0e-09
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene64413 SustainPine v3.0 187
• AutoFact: YTH domain containing protein 4.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Yth domain-containing protein, putative 2.147e-27
Internal
sp_v3.0_unigene72818 SustainPine v3.0 225
• AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AE97_PICSI 6.0e-28
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pseudouridylate synthase 1.349e-16
Putative N-terminus
sp_v3.0_unigene78111 SustainPine v3.0 237
• AutoFact: putative tRNA pseudouridine synthase [Arabidopsis thaliana] sp|O22928.1|PUSH_ARATH RecName: Full=Putative tRNA pseudouridine synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase gb|AAC16945.1| putative pseudouridine 9.0e-10
• FL-Next: sp=Putative tRNA pseudouridine synthase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene79134 SustainPine v3.0 95
• AutoFact: Unassigned protein
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain