Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA mismatch repair protein, N-terminal

Term: IPR014763  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene244 SustainPine v3.0 2841
AutoFact: DNA mismatch repair protein MLH1 [Arabidopsis thaliana] emb|CAA10163.1| MLH1 protein [Arabidopsis thaliana] emb|CAB78038.1| MLH1 protein [Arabidopsis thaliana] gb|AEE82726.1| DNA mismatch repair protein MLH1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene6681 SustainPine v3.0 1006
AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene8790 SustainPine v3.0 995
AutoFact: DNA mismatch repair protein -like [Oryza sativa Japonica Group] 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene9266 SustainPine v3.0 418
AutoFact: DNA mismatch repair protein -like [Oryza sativa Japonica Group] 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Putative N-terminus
sp_v3.0_unigene18726 SustainPine v3.0 1007
AutoFact: Tymo_45kd_70kd multi-domain protein 1.0e-10
Sma3: Putative arginine/serine-rich protein 3.506e-09
coding
sp_v3.0_unigene25456 SustainPine v3.0 843
AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] 3.00018e-42
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
N-terminus
sp_v3.0_unigene37469 SustainPine v3.0 1896
AutoFact: PWI multi-domain protein 4.0e-26
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Putative arginine/serine-rich protein 6.271e-09
Complete
sp_v3.0_unigene45294 SustainPine v3.0 128
AutoFact: DNA mismatch repair protein MLH1 [Arabidopsis thaliana] emb|CAA10163.1| MLH1 protein [Arabidopsis thaliana] emb|CAB78038.1| MLH1 protein [Arabidopsis thaliana] gb|AEE82726.1| DNA mismatch repair protein MLH1 [Arabidopsis thaliana] 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: DNA mismatch repair and recombination 4.361e-09
Internal
sp_v3.0_unigene52567 SustainPine v3.0 375
AutoFact: DNA mismatch repair protein [Shewanella putrefaciens CN-32] gb|ABP76994.1| DNA mismatch repair protein MutL [Shewanella putrefaciens CN-32] 9.0e-16
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
N-terminus
sp_v3.0_unigene62667 SustainPine v3.0 160
AutoFact: DNA mismatch repair protein mlh1, putative n=1 Tax=Ricinus communis RepID=B9S712_RICCO 4.0e-14
FL-Next: tr=DNA mismatch repair protein mlh1, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene64651 SustainPine v3.0 116
AutoFact: DNA mismatch repair protein n=3 Tax=Arabidopsis RepID=Q941I6_ARATH 2.0e-08
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene65993 SustainPine v3.0 319
AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene100757 SustainPine v3.0 142
AutoFact: DNA mismatch repair protein MLH1 [Arabidopsis thaliana] emb|CAA10163.1| MLH1 protein [Arabidopsis thaliana] emb|CAB78038.1| MLH1 protein [Arabidopsis thaliana] gb|AEE82726.1| DNA mismatch repair protein MLH1 [Arabidopsis thaliana] 1.0e-08
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene106598 SustainPine v3.0 496
AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene116465 SustainPine v3.0 791
AutoFact: ATPase [Cryptococcus neoformans var. neoformans JEC21] gb|AAW42236.1| ATPase, putative [Cryptococcus neoformans var. neoformans JEC21] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene120619 SustainPine v3.0 330
AutoFact: mismatch repair-related protein [Cryptococcus neoformans var. neoformans JEC21] gb|AAW42965.1| mismatch repair-related protein, putative [Cryptococcus neoformans var. neoformans JEC21] 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein F8D20.30 8.285e-06
C-terminus
sp_v3.0_unigene136380 SustainPine v3.0 294
AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene151079 SustainPine v3.0 455
AutoFact: Unassigned protein
FL-Next: sp=Zinc finger CCCH domain-containing protein 42; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene154424 SustainPine v3.0 181
AutoFact: Unassigned protein
FL-Next: sp=Zinc finger CCCH domain-containing protein 42; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene155868 SustainPine v3.0 357
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain