Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA mismatch repair protein, C-terminal

Term: IPR013507  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene52567 SustainPine v3.0 375
AutoFact: DNA mismatch repair protein [Shewanella putrefaciens CN-32] gb|ABP76994.1| DNA mismatch repair protein MutL [Shewanella putrefaciens CN-32] 9.0e-16
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
N-terminus
sp_v3.0_unigene53403 SustainPine v3.0 240
AutoFact: putative thiamin pyrophosphokinase [Oryza sativa Japonica Group] dbj|BAD53067.1| putative thiamin pyrophosphokinase [Oryza sativa Japonica Group] 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thiamin pyrophosphokinase, putative 8.35e-09
Internal
sp_v3.0_unigene53828 SustainPine v3.0 471
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] dbj|BAF01763.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82177.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AAA-type ATPase family protein, putative, expressed 1.451e-07
Internal
sp_v3.0_unigene62667 SustainPine v3.0 160
AutoFact: DNA mismatch repair protein mlh1, putative n=1 Tax=Ricinus communis RepID=B9S712_RICCO 4.0e-14
FL-Next: tr=DNA mismatch repair protein mlh1, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene64651 SustainPine v3.0 116
AutoFact: DNA mismatch repair protein n=3 Tax=Arabidopsis RepID=Q941I6_ARATH 2.0e-08
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene65993 SustainPine v3.0 319
AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene69460 SustainPine v3.0 233
AutoFact: Thiamin pyrophosphokinase, putative n=1 Tax=Ricinus communis RepID=B9SAN6_RICCO 7.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thiamin pyrophosphokinase, putative 7.149e-09
Internal
sp_v3.0_unigene77691 SustainPine v3.0 278
AutoFact: PREDICTED: similar to LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Gallus gallus] 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Probable U6 snRNA-associated Sm-like protein LSm4 4.31e-13
N-terminus
sp_v3.0_unigene77951 SustainPine v3.0 289
AutoFact: Related to U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=Sporisorium reilianum RepID=E6ZPV4_9BASI 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Probable U6 snRNA-associated Sm-like protein LSm4 2.848e-13
N-terminus
sp_v3.0_unigene78597 SustainPine v3.0 282
AutoFact: ATPase [Cryptococcus neoformans var. neoformans JEC21] ref|XP_775817.1| hypothetical protein CNBD2270 [Cryptococcus neoformans var. neoformans B-3501A] gb|EAL21170.1| hypothetical protein CNBD2270 [Cryptococcus neoformans var. neoformans B-3501A] gb|AAW43 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AAA-type ATPase family protein, putative, expressed 9.203e-08
Internal
sp_v3.0_unigene97460 SustainPine v3.0 417
AutoFact: pfam02138, Beach, Beige/BEACH domain 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene100757 SustainPine v3.0 142
AutoFact: DNA mismatch repair protein MLH1 [Arabidopsis thaliana] emb|CAA10163.1| MLH1 protein [Arabidopsis thaliana] emb|CAB78038.1| MLH1 protein [Arabidopsis thaliana] gb|AEE82726.1| DNA mismatch repair protein MLH1 [Arabidopsis thaliana] 1.0e-08
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene102304 SustainPine v3.0 585
AutoFact: putative thiamin pyrophosphokinase [Oryza sativa Japonica Group] dbj|BAD53067.1| putative thiamin pyrophosphokinase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative thiamin pyrophosphokinase 1.183e-12
C-terminus
sp_v3.0_unigene105555 SustainPine v3.0 373
AutoFact: thiamin pyrophosphokinase1 [Arabidopsis thaliana] gb|AAL25560.1| At1g02880/F22D16_33 [Arabidopsis thaliana] gb|AAM26660.1| At1g02880/F22D16_33 [Arabidopsis thaliana] gb|AEE27488.1| thiamin pyrophosphokinase1 [Arabidopsis thaliana] 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative thiamin pyrophosphokinase 9.682e-13
C-terminus
sp_v3.0_unigene106598 SustainPine v3.0 496
AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene116465 SustainPine v3.0 791
AutoFact: ATPase [Cryptococcus neoformans var. neoformans JEC21] gb|AAW42236.1| ATPase, putative [Cryptococcus neoformans var. neoformans JEC21] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene120619 SustainPine v3.0 330
AutoFact: mismatch repair-related protein [Cryptococcus neoformans var. neoformans JEC21] gb|AAW42965.1| mismatch repair-related protein, putative [Cryptococcus neoformans var. neoformans JEC21] 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein F8D20.30 8.285e-06
C-terminus
sp_v3.0_unigene136380 SustainPine v3.0 294
AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene148137 SustainPine v3.0 490
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 3.00004e-41
FL-Next: sp=Uncharacterized mitochondrial protein AtMg01250; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: RNA-directed DNA polymerase (Reverse transcriptase) 9.831e-10
Putative N-terminus
sp_v3.0_unigene151079 SustainPine v3.0 455
AutoFact: Unassigned protein
FL-Next: sp=Zinc finger CCCH domain-containing protein 42; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain