Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: SNF2-related

Term: IPR000330  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene64878 SustainPine v3.0 146
AutoFact: DNA repair and recombination protein RAD26, putative n=1 Tax=Ricinus communis RepID=B9SV29_RICCO 1.0e-16
FL-Next: tr=DNA repair and recombination protein RAD26, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene65355 SustainPine v3.0 179
AutoFact: SNF2 family DNA-dependent ATPase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RKN3_PHYPA 2.0e-22
FL-Next: tr=SNF2 family DNA-dependent ATPase; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene67156 SustainPine v3.0 242
AutoFact: SNF2 , helicase and zinc-finger domain-containing protein [Arabidopsis thaliana] gb|AEE28683.1| SNF2 , helicase and zinc-finger domain-containing protein [Arabidopsis thaliana] 5.0e-14
FL-Next: tr=Helicase-like transcription factor; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Chromatin remodeling complex subunit 2.964e-06
Internal
sp_v3.0_unigene68735 SustainPine v3.0 253
AutoFact: DNA repair helicase rad5,16, putative n=1 Tax=Ricinus communis RepID=B9STJ2_RICCO 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA repair helicase rad5,16, putative 2.683e-07
Internal
sp_v3.0_unigene70000 SustainPine v3.0 391
AutoFact: Unassigned protein
FL-Next: tr=ATP-dependent helicase, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene70152 SustainPine v3.0 356
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9IHX1_POPTR 1.0e-19
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromatin remodeling complex subunit 1.917e-07
Internal
sp_v3.0_unigene70411 SustainPine v3.0 207
AutoFact: Chromatin-remodeling factor CHD3 n=5 Tax=Oryza sativa RepID=Q5SML0_ORYSJ 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 family chromodomain-helicase 4.19e-08
Internal
sp_v3.0_unigene70424 SustainPine v3.0 419
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9T6H9_RICCO 1.0e-28
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromatin remodeling complex subunit 1.575e-06
Internal
sp_v3.0_unigene70792 SustainPine v3.0 440
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9IHX1_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 2.832e-06
Putative N-terminus
sp_v3.0_unigene70967 SustainPine v3.0 144
AutoFact: putative helicase [Oryza sativa Japonica Group] 8.0e-09
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene72765 SustainPine v3.0 280
AutoFact: SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RDV9_PHYPA 1.0e-29
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene73487 SustainPine v3.0 271
AutoFact: SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gb|AEC10493.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] 8.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2P 4.469e-08
Misassembled
sp_v3.0_unigene73538 SustainPine v3.0 245
AutoFact: SNF2 family DNA-dependent ATPase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TB07_PHYPA 8.0e-08
FL-Next: tr=SNF2 family DNA-dependent ATPase; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene73703 SustainPine v3.0 470
AutoFact: RecName: Full=Helicase SWR1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 2.257e-38
Internal
sp_v3.0_unigene73773 SustainPine v3.0 250
AutoFact: Sema domain containing protein 0.0001
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene74902 SustainPine v3.0 437
AutoFact: vacuolar H+-ATPase subunit A [Vigna unguiculata] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Vacuolar ATP synthase catalytic subunit A 1.49e-08
Internal
sp_v3.0_unigene75119 SustainPine v3.0 142
AutoFact: Putative DNA repair protein rhp54 n=1 Tax=Oryza sativa Japonica Group RepID=Q6Z6G1_ORYSJ 2.0e-11
FL-Next: sp=DNA repair and recombination protein RAD54; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene75376 SustainPine v3.0 286
AutoFact: SNF2 family DNA-dependent ATPase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TJL1_PHYPA 8.0e-19
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene75614 SustainPine v3.0 141
AutoFact: chromatin remodeling 5 [Arabidopsis thaliana] gb|AEC06230.1| chromatin remodeling 5 [Arabidopsis thaliana] 1.0e-16
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene75952 SustainPine v3.0 327
AutoFact: SNF2 superfamily chromatin remodeling protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D3Q8_LACBS 4.0e-36
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SNF2 super family 2.68e-06
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain