Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: SNF2-related

Term: IPR000330  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene7240 SustainPine v3.0 1915
AutoFact: methyltransferase [Arabidopsis thaliana] emb|CAB82287.1| putative protein [Arabidopsis thaliana] gb|AAL07072.1| unknown protein [Arabidopsis thaliana] gb|AAN13203.1| unknown protein [Arabidopsis thaliana] gb|AAN60352.1| unknown [Arabidopsis thaliana] gb|A 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene8738 SustainPine v3.0 3010
AutoFact: Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 n=3 Tax=Arabidopsis RepID=SM3L1_ARATH 0.0
FL-Next: tr=SNF2 domain-containing protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Sma3: Chromatin remodeling complex subunit 2.356e-11
Complete
sp_v3.0_unigene9004 SustainPine v3.0 657
AutoFact: Herpes_gp2 multi-domain protein 2.0e-13
coding
sp_v3.0_unigene9693 SustainPine v3.0 1206
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9H8P5_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene9944 SustainPine v3.0 309
AutoFact: DUF3535 domain containing protein 4.0e-12
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene10080 SustainPine v3.0 970
AutoFact: DUF3535 domain containing protein 0.0001
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: SNF2 super family 2.192e-06
Internal
sp_v3.0_unigene10613 SustainPine v3.0 1512
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q9M1I1.1|FB304_ARATH RecName: Full=F-box protein At3g54460 emb|CAB77566.1| RING finger-like protein [Arabidopsis thaliana] gb|AAM13867.1| unknown protein [Arabidopsis thaliana] gb|AAO42330.1| unknown protein [Arabid 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene11662 SustainPine v3.0 1186
AutoFact: putative AP2/EREBP transcription factor [Arabidopsis thaliana] 2.0e-16
FL-Next: sp=Ethylene-responsive transcription factor ABI4; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: AP2/ERF domain-containing transcription factor 7.199e-28
Complete
sp_v3.0_unigene12383 SustainPine v3.0 890
AutoFact: TATA-binding protein-associated factor MOT1, putative n=1 Tax=Ricinus communis RepID=B9SD95_RICCO 0.0
FL-Next: tr=TATA-binding protein-associated factor MOT1, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene12523 SustainPine v3.0 591
AutoFact: Putative SNF2 domain-containing protein n=2 Tax=Oryza sativa RepID=Q6H7U1_ORYSJ 0.0
FL-Next: sp=Putative chromatin-remodeling complex ATPase chain; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SNF2 super family 2.889e-06
Internal
sp_v3.0_unigene13348 SustainPine v3.0 473
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene14394 SustainPine v3.0 638
AutoFact: SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2Y8_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 family DNA-dependent ATPase 2.667e-11
C-terminus
sp_v3.0_unigene14989 SustainPine v3.0 456
AutoFact: chromatin remodeling factor18 [Arabidopsis thaliana] gb|AEE32273.1| chromatin remodeling factor18 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene15357 SustainPine v3.0 324
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTY5_RICCO 3.0e-26
FL-Next: tr=ATP binding protein, putative; Ricinus communis (Castor bean). 0.0
Sma3: Putative transcriptional regulator 3.114e-08
Internal
sp_v3.0_unigene15846 SustainPine v3.0 965
AutoFact: [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family 4.0e-13
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SNF2 family DNA-dependent ATPase 3.618e-06
N-terminus
sp_v3.0_unigene16824 SustainPine v3.0 723
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
N-terminus
sp_v3.0_unigene21071 SustainPine v3.0 1476
AutoFact: putative U1 snRNP 70K protein [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: U1 small nuclear ribonucleoprotein 6.725e-12
Putative Complete
sp_v3.0_unigene24065 SustainPine v3.0 3485
AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI00019843BD 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: DNA repair helicase rad5,16, putative 1.361e-07
Complete
sp_v3.0_unigene24607 SustainPine v3.0 475
AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9I5Q4_POPTR 6.0e-06
FL-Next: tr=Putative uncharacterized protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene24692 SustainPine v3.0 1463
AutoFact: putative transcriptional regulator [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 2.319e-08
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain