Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Clathrin, heavy chain/VPS, 7-fold repeat

Term: IPR000547  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene237 SustainPine v3.0 3768
AutoFact: RecName: Full=Vacuolar protein sorting-associated protein 41 homolog gb|AAB60857.1| VPS41 [Solanum lycopersicum] 0.0
FL-Next: sp=Vacuolar protein sorting-associated protein 41 homolog; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Sma3: Vacuolar protein sorting-associated protein 41 homolog 5.097e-09
C-terminus
sp_v3.0_unigene32062 SustainPine v3.0 6093
AutoFact: Clathrin heavy chain, putative; 28833-19741 n=27 Tax=Magnoliophyta RepID=Q9SRM1_ARATH 0.0
FL-Next: sp=Clathrin heavy chain 2; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Clathrin heavy chain, putative 0.0
Complete
sp_v3.0_unigene75746 SustainPine v3.0 343
AutoFact: clathrin heavy chain, putative [Arabidopsis thaliana] 2.0e-36
FL-Next: sp=Clathrin heavy chain 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Clathrin heavy chain 1.592e-16
Internal
sp_v3.0_unigene79271 SustainPine v3.0 277
AutoFact: Vacuolar protein sorting vps41, putative n=1 Tax=Ricinus communis RepID=B9SCM9_RICCO 2.0e-29
FL-Next: sp=Vacuolar protein sorting-associated protein 41 homolog; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Sma3: Vacuolar protein sorting-associated protein 41 homolog 4.233e-09
Internal
sp_v3.0_unigene148064 SustainPine v3.0 370
AutoFact: clathrin heavy chain [Glycine max] 4.0e-28
FL-Next: sp=Clathrin heavy chain 2; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Clathrin heavy chain, putative 2.807e-08
Internal
sp_v3.0_unigene150983 SustainPine v3.0 483
AutoFact: Clathrin heavy chain, putative n=9 Tax=Arthropoda RepID=E0VD43_PEDHC 1.0e-24
FL-Next: sp=Clathrin heavy chain 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene154064 SustainPine v3.0 357
AutoFact: Clathrin heavy chain n=2 Tax=Chlamydomonas reinhardtii RepID=A8I4S9_CHLRE 1.0e-18
FL-Next: sp=Clathrin heavy chain 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene194651 SustainPine v3.0 284
AutoFact: RecName: Full=Vacuolar protein sorting-associated protein 41 homolog gb|AAB60857.1| VPS41 [Solanum lycopersicum] 6.0e-23
FL-Next: sp=Vacuolar protein sorting-associated protein 41 homolog; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Sma3: Vacuolar protein sorting-associated protein 41 homolog 4.688e-09
Internal
sp_v3.0_unigene199639 SustainPine v3.0 344
AutoFact: PREDICTED: similar to Clathrin, heavy polypeptide (Hc) n=1 Tax=Ciona intestinalis RepID=UPI000180C219 7.0e-34
FL-Next: sp=Clathrin heavy chain 2; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Clathrin heavy chain 3.93e-12
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain