Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Pseudouridine synthase II

Term: IPR002501  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene227 SustainPine v3.0 786
AutoFact: Pseudouridylate synthase/ transporter n=1 Tax=Zea mays RepID=B6TRU2_MAIZE 0.0
FL-Next: sp=H/ACA ribonucleoprotein complex subunit 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene410 SustainPine v3.0 1077
AutoFact: Tesmin/TSO1-like CXC domain-containing protein [Arabidopsis thaliana] emb|CAB43914.1| putative transcription factor [Arabidopsis thaliana] emb|CAB79658.1| putative transcription factor [Arabidopsis thaliana] dbj|BAC43254.1| putative transcription factor [ 0.0
FL-Next: sp=Protein tesmin/TSO1-like CXC 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Tesmin-like 1.902e-09
Internal
sp_v3.0_unigene2444 SustainPine v3.0 3636
AutoFact: pfam03638, CXC, Tesmin/TSO1-like CXC domain 2.0e-21
FL-Next: sp=Protein tesmin/TSO1-like CXC 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Tso1, putative 5.726e-17
Complete
sp_v3.0_unigene3673 SustainPine v3.0 1889
AutoFact: H/ACA ribonucleoprotein complex subunit 4 [Arabidopsis thaliana] sp|Q9LD90.1|DKC1_ARATH RecName: Full=H/ACA ribonucleoprotein complex subunit 4; AltName: Full=Nopp-140-associated protein of 57 kDa homolog; Short=AtNAP57; AltName: Full=Nucleolar protein NA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Centromere/microtubule binding protein cbf5, putative 4.506e-08
Complete
sp_v3.0_unigene38924 SustainPine v3.0 516
AutoFact: tRNA pseudouridine synthase B n=3 Tax=Arabidopsis RepID=Q0WVR7_ARATH 5.0e-25
FL-Next: tr=tRNA synthase-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene43618 SustainPine v3.0 318
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RKN4_RICCO 6.0e-27
FL-Next: Isoform 3 of Protein tesmin/TSO1-like CXC 6 OS=Arabidopsis thaliana GN=TCX6 0.0
Internal
sp_v3.0_unigene72258 SustainPine v3.0 209
AutoFact: centromere/microtubule binding protein cbf5 [Cryptococcus neoformans var. neoformans JEC21] ref|XP_775935.1| hypothetical protein CNBD3420 [Cryptococcus neoformans var. neoformans B-3501A] gb|EAL21288.1| hypothetical protein CNBD3420 [Cryptococcus neoform 4.0e-09
FL-Next: sp=H/ACA ribonucleoprotein complex subunit 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene95177 SustainPine v3.0 575
AutoFact: Tesmin/TSO1-like CXC domain-containing protein [Arabidopsis thaliana] emb|CAB43914.1| putative transcription factor [Arabidopsis thaliana] emb|CAB79658.1| putative transcription factor [Arabidopsis thaliana] dbj|BAC43254.1| putative transcription factor [ 0.0
FL-Next: sp=Protein tesmin/TSO1-like CXC 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Tso1, putative 4.335e-17
Internal
sp_v3.0_unigene96551 SustainPine v3.0 735
AutoFact: Pseudouridylate synthase/ transporter n=1 Tax=Zea mays RepID=B6TRU2_MAIZE 0.0
FL-Next: sp=H/ACA ribonucleoprotein complex subunit 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene103663 SustainPine v3.0 281
AutoFact: Tesmin/TSO1-like CXC domain-containing protein [Arabidopsis thaliana] emb|CAB43914.1| putative transcription factor [Arabidopsis thaliana] emb|CAB79658.1| putative transcription factor [Arabidopsis thaliana] dbj|BAC43254.1| putative transcription factor [ 1.0e-34
FL-Next: sp=Protein tesmin/TSO1-like CXC 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Tesmin-like 3.06e-09
Internal
sp_v3.0_unigene154054 SustainPine v3.0 411
AutoFact: H/ACA ribonucleoprotein complex subunit 4 [Bos taurus] gb|AAI34582.1| DKC1 protein [Bos taurus] gb|DAA13229.1| dyskerin [Bos taurus] 8.00141e-43
FL-Next: sp=H/ACA ribonucleoprotein complex subunit 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Centromere/microtubule binding protein cbf5, putative 3.187e-08
Internal
sp_v3.0_unigene158638 SustainPine v3.0 311
AutoFact: PREDICTED: probable tRNA pseudouridine synthase 1 n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI0001DE8DE1 4.0e-16
FL-Next: tr=Putative uncharacterized protein; (Phytophthora megasperma f. sp. glycines). 0.0
Putative N-terminus
sp_v3.0_unigene159295 SustainPine v3.0 326
AutoFact: H/ACA ribonucleoprotein complex subunit 4 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CI46_9EUKA 2.0e-23
FL-Next: sp=H/ACA ribonucleoprotein complex subunit 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene165104 SustainPine v3.0 135
AutoFact: Tesmin/TSO1-like CXC domain-containing protein [Arabidopsis thaliana] emb|CAB43914.1| putative transcription factor [Arabidopsis thaliana] emb|CAB79658.1| putative transcription factor [Arabidopsis thaliana] dbj|BAC43254.1| putative transcription factor [ 8.0e-19
FL-Next: sp=Protein tesmin/TSO1-like CXC 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Tesmin-like 2.258e-09
Internal
sp_v3.0_unigene165603 SustainPine v3.0 378
AutoFact: Pseudouridylate synthase/ transporter n=1 Tax=Zea mays RepID=B6TRU2_MAIZE 2.0e-31
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain