Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, HIT-type

Term: IPR007529  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene211 SustainPine v3.0 1653
AutoFact: zinc finger protein [Nicotiana benthamiana] 4.06377e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene1912 SustainPine v3.0 880
AutoFact: PAPA-1-like and zinc finger-HIT domain-containing protein [Arabidopsis thaliana] gb|AAK59429.1| unknown protein [Arabidopsis thaliana] gb|AAM51332.1| unknown protein [Arabidopsis thaliana] gb|AEE74436.1| PAPA-1-like and zinc finger-HIT domain-containing p 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene11991 SustainPine v3.0 375
AutoFact: DEAD-box ATP-dependent RNA helicase 41 [Arabidopsis thaliana] ref|NP_001030621.1| DEAD-box ATP-dependent RNA helicase 41 [Arabidopsis thaliana] sp|Q3EBD3.1|RH41_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 41 gb|AEE73756.1| DEAD-box ATP-depende 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 41 1.019e-09
Internal
sp_v3.0_unigene12758 SustainPine v3.0 864
AutoFact: zf-UBP domain containing protein 6.0e-05
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
C-terminus
sp_v3.0_unigene14217 SustainPine v3.0 527
AutoFact: zinc finger protein [Nicotiana benthamiana] 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene14271 SustainPine v3.0 794
AutoFact: probable ATP-dependent RNA helicase DDX59 [Danio rerio] gb|AAI34851.1| LOC562123 protein [Danio rerio] 5.0e-13
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 41; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 41 1.248e-09
Putative N-terminus
sp_v3.0_unigene16870 SustainPine v3.0 770
AutoFact: zinc finger protein [Nicotiana benthamiana] 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene27946 SustainPine v3.0 3732
AutoFact: HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] dbj|BAC42342.1| unknown protein [Arabidopsis thaliana] gb|AEE33398.1| HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene34372 SustainPine v3.0 918
AutoFact: HIT-type zinc finger protein [Arabidopsis thaliana] dbj|BAD44383.1| unnamed protein product [Arabidopsis thaliana] gb|ABE77402.1| At4g28820 [Arabidopsis thaliana] gb|AEE85550.1| HIT-type zinc finger protein [Arabidopsis thaliana] 8.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene34987 SustainPine v3.0 967
AutoFact: HIT-type Zinc finger family protein [Arabidopsis thaliana] dbj|BAE99404.1| hypothetical protein [Arabidopsis thaliana] gb|AEE27763.1| HIT-type Zinc finger family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene47468 SustainPine v3.0 1032
AutoFact: Predicted Zn-finger protein (ISS) [Ostreococcus tauri] emb|CAL52783.1| Predicted Zn-finger protein (ISS) [Ostreococcus tauri] 8.0e-12
FL-Next: tr=HIT zinc finger family protein, expressed; Oryza sativa subsp. japonica (Rice). 0.0
C-terminus
sp_v3.0_unigene47779 SustainPine v3.0 2034
AutoFact: HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] dbj|BAC42342.1| unknown protein [Arabidopsis thaliana] gb|AEE33398.1| HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene50381 SustainPine v3.0 1425
AutoFact: zinc finger protein [Nicotiana benthamiana] 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene53909 SustainPine v3.0 306
AutoFact: HIT-type Zinc finger family protein n=4 Tax=Arabidopsis RepID=F4KC50_ARATH 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative uncharacterized protein OSJNBb0018B10.17 7.797e-06
Putative N-terminus
sp_v3.0_unigene68718 SustainPine v3.0 224
AutoFact: HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] dbj|BAC42342.1| unknown protein [Arabidopsis thaliana] gb|AEE33398.1| HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] 6.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene71802 SustainPine v3.0 220
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Os12g0561200 protein 3.899e-06
Putative C-terminus
sp_v3.0_unigene72510 SustainPine v3.0 297
AutoFact: HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] dbj|BAC42342.1| unknown protein [Arabidopsis thaliana] gb|AEE33398.1| HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] 6.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene102857 SustainPine v3.0 593
AutoFact: pfam04438, zf-HIT, HIT zinc finger 7.0e-11
FL-Next: tr=Putative uncharacterized protein OSJNBb0018B10.17; Oryza sativa subsp. japonica (Rice). 0.0
Putative N-terminus
sp_v3.0_unigene106507 SustainPine v3.0 372
AutoFact: DEAD-box ATP-dependent RNA helicase 41 n=4 Tax=Oryza sativa RepID=RH41_ORYSJ 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 41 1.082e-09
Internal
sp_v3.0_unigene107792 SustainPine v3.0 311
AutoFact: HIT zinc finger family protein n=5 Tax=Andropogoneae RepID=B6TE25_MAIZE 1.0e-22
FL-Next: tr=Putative uncharacterized protein Sb01g031320; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain