Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Smr protein/MutS2 C-terminal

Term: IPR002625  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene116907 SustainPine v3.0 275
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SAK0.1|PP132_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79490, mitochondrial; AltName: Full=Protein EMBRYO DEFECTIVE 2217; Flags: Precursor gb|AAD30226.1|AC00 8.0e-22
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g79490, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene118475 SustainPine v3.0 225
• AutoFact: DUF296 domain containing protein 3.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-binding protein-like 5.956e-17
Internal
sp_v3.0_unigene119152 SustainPine v3.0 273
• AutoFact: AT-hook DNA-binding protein n=1 Tax=Catharanthus roseus RepID=A1DR80_CATRO 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-binding protein-like 4.216e-29
Internal
sp_v3.0_unigene121490 SustainPine v3.0 403
• AutoFact: DNA mismatch repair protein MutS2 [Arabidopsis thaliana] gb|AAF06041.1|AC009360_6 Contains similarity to gb|D90908 DNA mismatch repair protein MutS2 from Synechocystis sp. and is a member of PF|00488 Muts family of mismatch repair proteins [Arabidopsis th 4.0e-25
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: DNA mismatch repair protein muts2, putative 6.427e-09
Internal
sp_v3.0_unigene122440 SustainPine v3.0 275
• AutoFact: DNA mismatch repair protein MutS2 [Arabidopsis thaliana] gb|AAF06041.1|AC009360_6 Contains similarity to gb|D90908 DNA mismatch repair protein MutS2 from Synechocystis sp. and is a member of PF|00488 Muts family of mismatch repair proteins [Arabidopsis th 4.0e-23
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene124581 SustainPine v3.0 464
• AutoFact: mitochondrial RNA editing factor 1 [Arabidopsis thaliana] sp|Q9LTF4.1|PP429_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At5g52630 dbj|BAA98081.1| selenium-binding protein-like [Arabidopsis thaliana] gb|AED96243.1| mitochondria 9.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 9.951e-07
Internal
sp_v3.0_unigene124752 SustainPine v3.0 291
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 4.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 3.58732e-43
N-terminus
sp_v3.0_unigene129203 SustainPine v3.0 635
• AutoFact: Pentatricopeptide repeat protein PPR1106-17 n=2 Tax=Andropogoneae RepID=B6SWY6_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 2.798e-18
Internal
sp_v3.0_unigene130332 SustainPine v3.0 346
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SAK0.1|PP132_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79490, mitochondrial; AltName: Full=Protein EMBRYO DEFECTIVE 2217; Flags: Precursor gb|AAD30226.1|AC00 5.0e-22
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g79490, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene141299 SustainPine v3.0 408
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SAK0.1|PP132_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79490, mitochondrial; AltName: Full=Protein EMBRYO DEFECTIVE 2217; Flags: Precursor gb|AAD30226.1|AC00 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene141673 SustainPine v3.0 379
• AutoFact: Auxin response factor 1 n=2 Tax=Gossypium RepID=Q3Y6G6_GOSBA 8.0e-14
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Auxin response factor 1 1.37e-10
N-terminus
sp_v3.0_unigene148734 SustainPine v3.0 337
• AutoFact: DUF296 domain containing protein 6.0e-12
• FL-Next: sp=Putative DNA-binding protein ESCAROLA; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: AT-hook DNA-binding protein 4.252e-14
Putative C-terminus
sp_v3.0_unigene160905 SustainPine v3.0 481
• AutoFact: ESC, putative n=1 Tax=Ricinus communis RepID=B9RDE5_RICCO 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-binding protein-like 5.413e-26
Internal
sp_v3.0_unigene161905 SustainPine v3.0 449
• AutoFact: Auxin response factor 1 n=2 Tax=Gossypium RepID=Q3Y6G6_GOSBA 8.0e-14
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Auxin response factor 1 5.861e-11
N-terminus
sp_v3.0_unigene161923 SustainPine v3.0 362
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AT-hook DNA-binding protein 8.835e-08
Putative N-terminus
sp_v3.0_unigene163445 SustainPine v3.0 186
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g53360, mitochondrial; Flags: Precursor emb|CAB67643.1| putative protein [Arabidopsis thaliana] gb|AEE7 4.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 5.014e-09
N-terminus
sp_v3.0_unigene167140 SustainPine v3.0 307
• AutoFact: DNA mismatch repair protein MutS2-like [Arabidopsis thaliana] 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene167894 SustainPine v3.0 231
• AutoFact: Unassigned protein
• FL-Next: sp=Pentatricopeptide repeat-containing protein At5g46580, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene168354 SustainPine v3.0 187
• AutoFact: Unassigned protein
• FL-Next: sp=Pentatricopeptide repeat-containing protein At4g16390, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene210246 SustainPine v3.0 535
• AutoFact: Putative auxin response factor 2/1/9 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY0_CYCRU 0.0
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Auxin response factor, putative 3.614e-25
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain