Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Smr protein/MutS2 C-terminal

Term: IPR002625  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene50908 SustainPine v3.0 297
AutoFact: Unassigned protein
FL-Next: sp=Pentatricopeptide repeat-containing protein At4g16390, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene53000 SustainPine v3.0 202
AutoFact: genomes uncoupled 1 protein [Arabidopsis thaliana] sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g31400, chloroplastic; Flags: Precursor gb|AAD26479.1| unknown protein [Arabidopsis thaliana] gb|AEC08542.1| genomes un 9.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene57078 SustainPine v3.0 318
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group] 9.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 7.131e-40
Putative N-terminus
sp_v3.0_unigene58519 SustainPine v3.0 188
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] ref|NP_973860.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q8GYP6.1|PPR49_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18900 dbj|BAC42129 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene59035 SustainPine v3.0 447
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R930_RICCO 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g18900; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene61495 SustainPine v3.0 324
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T392_RICCO 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 5.385e-17
Internal
sp_v3.0_unigene63269 SustainPine v3.0 244
AutoFact: auxin response factor 10 [Arabidopsis thaliana] sp|Q9SKN5.1|ARFJ_ARATH RecName: Full=Auxin response factor 10 gb|AAG54000.1|AF336919_1 auxin response factor 10 [Arabidopsis thaliana] gb|AAK17141.1|AF325073_1 unknown protein [Arabidopsis thaliana] gb|AAD20 1.0e-32
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: Auxin response factor, putative 1.4013e-45
Internal
sp_v3.0_unigene65977 SustainPine v3.0 336
AutoFact: DNA-binding protein n=1 Tax=Zea mays RepID=B6TYB6_MAIZE 5.0e-05
FL-Next: tr=DNA-binding protein; Zea mays (Maize). 0.0
Sma3: DNA-binding protein-like 6.269e-20
Internal
sp_v3.0_unigene66126 SustainPine v3.0 336
AutoFact: pentatricopeptide, putative [Oryza sativa Japonica Group] gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group] 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 9.35e-24
Internal
sp_v3.0_unigene66558 SustainPine v3.0 476
AutoFact: AT-hook motif nuclear-localized protein 19 [Arabidopsis thaliana] gb|AAF04888.1|AC011437_3 hypothetical protein [Arabidopsis thaliana] gb|AAM62794.1| putative DNA-binding protein [Arabidopsis thaliana] gb|AAO64817.1| At3g04570 [Arabidopsis thaliana] dbj|B 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene68426 SustainPine v3.0 333
AutoFact: AT-hook DNA-binding protein n=1 Tax=Catharanthus roseus RepID=A1DR80_CATRO 7.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-binding protein-like 8.686e-20
Internal
sp_v3.0_unigene68544 SustainPine v3.0 297
AutoFact: Auxin response factor, putative n=1 Tax=Ricinus communis RepID=B9RR61_RICCO 1.00053e-42
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: Auxin response factor, putative 6.01858e-42
Internal
sp_v3.0_unigene70079 SustainPine v3.0 220
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SA66_RICCO 3.0e-19
FL-Next: sp=Pentatricopeptide repeat-containing protein At4g16390, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene70097 SustainPine v3.0 441
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R902_RICCO 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g74850, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene70207 SustainPine v3.0 357
AutoFact: salt-inducible protein homolog [Arabidopsis thaliana] emb|CAB78681.1| salt-inducible protein homolog [Arabidopsis thaliana] 1.0e-13
FL-Next: sp=Pentatricopeptide repeat-containing protein At4g16390, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene73757 SustainPine v3.0 461
AutoFact: Unassigned protein
FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
N-terminus
sp_v3.0_unigene78224 SustainPine v3.0 238
AutoFact: Auxin response factor 27 n=1 Tax=Zea mays RepID=D9HNV4_MAIZE 6.0e-18
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: Auxin response factor, putative 2.912e-28
Internal
sp_v3.0_unigene78606 SustainPine v3.0 186
AutoFact: Unassigned protein
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Internal
sp_v3.0_unigene78673 SustainPine v3.0 212
AutoFact: COPZ2; Zeta2-COP 1.0e-05
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Internal
sp_v3.0_unigene79057 SustainPine v3.0 333
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RQZ0_RICCO 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain