Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Smr protein/MutS2 C-terminal

Term: IPR002625  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene13444 SustainPine v3.0 1987
AutoFact: DUF1771 domain containing protein 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene13963 SustainPine v3.0 1166
AutoFact: Putative auxin response factor 6 n=1 Tax=Amborella trichopoda RepID=E0WD84_AMBTC 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: Auxin response factor, putative 3.37601e-41
Misassembled
sp_v3.0_unigene14497 SustainPine v3.0 488
AutoFact: Pentatricopeptide-containing protein (Fragment) n=3 Tax=Pseudotsuga RepID=C6F9Z2_PSEMZ 4.99983e-42
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g74750; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene15105 SustainPine v3.0 315
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R930_RICCO 9.0e-19
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g18900; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene18544 SustainPine v3.0 970
AutoFact: COPZ2; Zeta2-COP 4.0e-14
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Complete
sp_v3.0_unigene22122 SustainPine v3.0 1781
AutoFact: DUF1771 multi-domain protein 1.0e-16
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: PRLI-interacting factor N 6.823e-06
Putative C-terminus
sp_v3.0_unigene23340 SustainPine v3.0 880
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9STJ6_RICCO 4.06377e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ESC, putative 2.932e-15
C-terminus
sp_v3.0_unigene23988 SustainPine v3.0 2896
AutoFact: auxin response factor 6 [Arabidopsis thaliana] sp|Q9ZTX8.2|ARFF_ARATH RecName: Full=Auxin response factor 6 gb|AAT67072.1| ARF6 [Arabidopsis thaliana] gb|AEE31207.1| auxin response factor 6 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin response factor, putative 2.562e-34
C-terminus
sp_v3.0_unigene27316 SustainPine v3.0 1092
AutoFact: Auxin response factor n=1 Tax=Dimocarpus longan RepID=D0EZH0_9ROSI 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin response factor 1 7.431e-14
N-terminus
sp_v3.0_unigene32211 SustainPine v3.0 1082
AutoFact: AT-hook DNA-binding protein n=1 Tax=Catharanthus roseus RepID=A1DR80_CATRO 0.0
FL-Next: tr=AT-hook DNA-binding protein; Catharanthus roseus (Madagascar periwinkle) (Vinca rosea). 0.0
Sma3: DNA-binding protein-like 1.414e-19
Complete
sp_v3.0_unigene32961 SustainPine v3.0 863
AutoFact: COPZ2; Zeta2-COP 2.0e-10
FL-Next: tr=Putative uncharacterized protein Sb01g000630; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Complete
sp_v3.0_unigene36070 SustainPine v3.0 909
AutoFact: AT-hook DNA-binding protein [Catharanthus roseus] 4.00001e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AT-hook DNA-binding protein 6.453e-18
C-terminus
sp_v3.0_unigene37518 SustainPine v3.0 1036
AutoFact: auxin response factor 5 [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin response factor, putative 3.16497e-41
Internal
sp_v3.0_unigene38893 SustainPine v3.0 1057
AutoFact: plastid transcriptionally active 2 [Arabidopsis thaliana] sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74850, chloroplastic; AltName: Full=Protein PLASTID TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor gb|AAD55291.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene40663 SustainPine v3.0 1535
AutoFact: AT-hook DNA-binding protein n=1 Tax=Catharanthus roseus RepID=A1DR80_CATRO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-binding protein-like 4.918e-29
Complete
sp_v3.0_unigene41217 SustainPine v3.0 3576
AutoFact: auxin response factor-like protein [Mangifera indica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin response factor, putative 4.904e-28
Complete
sp_v3.0_unigene42348 SustainPine v3.0 940
AutoFact: DUF296 domain containing protein 3.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-binding protein-like 3.543e-29
N-terminus
sp_v3.0_unigene43484 SustainPine v3.0 133
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SSF9.1|PP123_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74750 gb|AAD55301.1|AC008263_32 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana] gb|AEE35629.1| 3.0e-08
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g74750; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene44442 SustainPine v3.0 1003
AutoFact: DUF296 domain containing protein 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AT-hook DNA-binding protein 1.664e-11
Putative C-terminus
sp_v3.0_unigene49451 SustainPine v3.0 1044
AutoFact: AT-hook DNA-binding protein n=1 Tax=Catharanthus roseus RepID=A1DR80_CATRO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-binding protein-like 6.77e-26
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain