Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: MULE transposase domain

Term: IPR018289  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene72143 SustainPine v3.0 341
• AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 5.0e-31
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
N-terminus
sp_v3.0_unigene72148 SustainPine v3.0 274
• AutoFact: Putative Ty3-gypsy-like retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQ11_ARATH 7.0e-23
• FL-Next: tr=At2g06190; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Gag-Pol polyprotein 9.502e-10
Putative C-terminus
sp_v3.0_unigene72314 SustainPine v3.0 303
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Taxus baccata RepID=Q56GF5_TAXBA 3.0e-23
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 1.38e-25
Internal
sp_v3.0_unigene72318 SustainPine v3.0 258
• AutoFact: Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max RepID=B5U9F7_SOYBN 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene73621 SustainPine v3.0 293
• AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD4_SILLA 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.451e-16
Putative Complete
sp_v3.0_unigene76157 SustainPine v3.0 357
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Taxus baccata RepID=Q56GF5_TAXBA 6.0e-33
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.832e-19
Putative N-terminus
sp_v3.0_unigene76443 SustainPine v3.0 249
• AutoFact: Structural molecule, putative n=1 Tax=Ricinus communis RepID=B9SRI7_RICCO 3.0e-14
• FL-Next: sp=Probable plastid-lipid-associated protein 4, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chromosome chr12 scaffold_38, whole genome shotgun sequence 8.725e-06
Internal
sp_v3.0_unigene77719 SustainPine v3.0 343
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=O82684_GINBI 1.0e-26
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 1.103e-28
Putative C-terminus
sp_v3.0_unigene77840 SustainPine v3.0 349
• AutoFact: Unassigned protein
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Transposon protein, putative, unclassified 2.994e-09
Putative C-terminus
sp_v3.0_unigene79574 SustainPine v3.0 203
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=O82684_GINBI 4.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 0.0
Putative C-terminus
sp_v3.0_unigene93960 SustainPine v3.0 1377
• AutoFact: DUF659 multi-domain protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene95359 SustainPine v3.0 1128
• AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gag-Pol polyprotein 1.167e-10
C-terminus
sp_v3.0_unigene95406 SustainPine v3.0 538
• AutoFact: cysteine-rich receptor-like protein kinase 6 [Arabidopsis thaliana] sp|Q9C5S9.1|CRK6_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 6; Short=Cysteine-rich RLK6; AltName: Full=Receptor-like protein kinase 5; Flags: Precursor gb|AAK28316.1|A 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_278, whole genome shotgun sequence 9.668e-16
Putative C-terminus
sp_v3.0_unigene96122 SustainPine v3.0 808
• AutoFact: calmodulin-binding protein-like protein [Arabidopsis thaliana] dbj|BAB02602.1| unnamed protein product [Arabidopsis thaliana] gb|AEE75381.1| calmodulin-binding protein-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Calmodulin binding protein, putative 1.088e-17
Complete
sp_v3.0_unigene96174 SustainPine v3.0 842
• AutoFact: Pol protein (Fragment) n=2 Tax=Picea abies RepID=Q9M6P0_PICAB 0.0
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Polyprotein 4.883e-15
C-terminus
sp_v3.0_unigene97999 SustainPine v3.0 680
• AutoFact: PREDICTED: similar to polyprotein n=1 Tax=Vitis vinifera RepID=UPI0001983558 0.0
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.639e-27
Complete
sp_v3.0_unigene98384 SustainPine v3.0 589
• AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 0.0
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.225e-22
Putative Complete
sp_v3.0_unigene98840 SustainPine v3.0 559
• AutoFact: Unassigned protein 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene98895 SustainPine v3.0 386
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2R3G0_ORYSJ 4.0e-24
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 2.104e-10
Internal
sp_v3.0_unigene99014 SustainPine v3.0 624
• AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gag-Pol polyprotein 4.138e-12
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain