Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA ligase, ATP-dependent, conserved site

Term: IPR016059  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene163234 SustainPine v3.0 295
• AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=B9H8L1_POPTR 3.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene164016 SustainPine v3.0 229
• AutoFact: tetratricopeptide repeat domain-containing protein-like protein [Arabidopsis thaliana] emb|CAA16957.1| putative protein [Arabidopsis thaliana] emb|CAA22561.1| putative protein [Arabidopsis thaliana] emb|CAB79951.1| putative protein [Arabidopsis thaliana] 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene164252 SustainPine v3.0 294
• AutoFact: DNA ligase n=1 Tax=Ricinus communis RepID=B9SPY8_RICCO 1.0e-14
• FL-Next: Isoform 3 of DNA ligase 1 OS=Arabidopsis thaliana GN=LIG1 0.0
Internal
sp_v3.0_unigene165865 SustainPine v3.0 344
• AutoFact: ethylene-responsive transcription factor 1A [Medicago truncatula] 9.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene167164 SustainPine v3.0 202
• AutoFact: AP2 domain containing protein 3.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 1.26e-27
Internal
sp_v3.0_unigene183484 SustainPine v3.0 428
• AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=B9GYE3_POPTR 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
Putative C-terminus
sp_v3.0_unigene185181 SustainPine v3.0 472
• AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AED92812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene187301 SustainPine v3.0 453
• AutoFact: Unassigned protein
• FL-Next: tr=Tetratricopeptide repeat-containing protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Sma3: Eukaryotic translation initiation factor 3 subunit, putative 4.223e-08
Putative N-terminus
sp_v3.0_unigene188401 SustainPine v3.0 411
• AutoFact: AP2 domain containing protein 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
C-terminus
sp_v3.0_unigene188797 SustainPine v3.0 1187
• AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L0Z9_MALDO 3.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 4.604e-30
N-terminus
sp_v3.0_unigene189127 SustainPine v3.0 787
• AutoFact: Ethylene-responsive element binding protein1 homolog n=1 Tax=Matricaria chamomilla RepID=Q9SST7_9ASTR 4.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
N-terminus
sp_v3.0_unigene194186 SustainPine v3.0 78
• AutoFact: Unassigned protein
• FL-Next: tr=Eukaryotic translation initiation factor 3 subunit, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene195356 SustainPine v3.0 306
• AutoFact: Ethylene responsive transcription factor 1a n=1 Tax=Prunus salicina RepID=C0J9I9_9ROSA 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 1.56385e-42
Internal
sp_v3.0_unigene200893 SustainPine v3.0 457
• AutoFact: AP2 domain transcription factor RAP2 n=1 Tax=Cucumis melo subsp. melo RepID=E5GB56_CUCME 8.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 6.005e-38
Internal
sp_v3.0_unigene201846 SustainPine v3.0 195
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene203528 SustainPine v3.0 482
• AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA3_POPTR 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
N-terminus
sp_v3.0_unigene205762 SustainPine v3.0 708
• AutoFact: Ethylene-responsive element binding factor-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZDA4_PICSI 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 4.378e-28
Putative Complete
sp_v3.0_unigene205780 SustainPine v3.0 505
• AutoFact: Dehydration-responsive element binding protein 3 n=1 Tax=Glycine max RepID=Q2VEU3_SOYBN 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 1.4013e-45
N-terminus
sp_v3.0_unigene206113 SustainPine v3.0 273
• AutoFact: Ethylene responsive protein n=2 Tax=Zea mays RepID=B6TIX1_MAIZE 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene209302 SustainPine v3.0 670
• AutoFact: Ethylene-responsive element binding factor-like protein n=5 Tax=Picea sitchensis RepID=E0ZGY9_PICSI 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 2.114e-34
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain