Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA-directed RNA polymerase III largest subunit

Term: IPR015700  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene139 SustainPine v3.0 5175
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RSV5_PHYPA 0.0
• FL-Next: sp=DNA-directed RNA polymerase; Pseudotsuga menziesii var. menziesii. Plastid; Chloroplast. 0.0
• Sma3: DNA-directed RNA polymerase 4.286e-38
Complete
sp_v3.0_unigene2815 SustainPine v3.0 6319
• AutoFact: DNA-directed RNA polymerase n=37 Tax=Spermatophyta RepID=C5YGY9_SORBI 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 0.0
Complete
sp_v3.0_unigene24355 SustainPine v3.0 426
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RSV5_PHYPA 1.0e-09
• FL-Next: sp=DNA-directed RNA polymerase; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus
sp_v3.0_unigene44586 SustainPine v3.0 424
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Pinus nigra RepID=Q2TUP3_9CONI 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 0.0
Internal
sp_v3.0_unigene55939 SustainPine v3.0 186
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Selaginella moellendorffii RepID=D8SDS6_SELML 6.0e-22
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 0.0
Internal
sp_v3.0_unigene57508 SustainPine v3.0 322
• AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Spermatophyta RepID=Q2TUM9_9CONI 2.0e-26
• FL-Next: sp=DNA-directed RNA polymerase; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene73982 SustainPine v3.0 496
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Marasmius alliaceus RepID=Q5I2D9_9AGAR 0.0
• FL-Next: sp=DNA-directed RNA polymerase subunit beta''; Nageia nagi. Plastid; Chloroplast. 0.0
• Sma3: DNA-directed RNA polymerase 0.0
Internal
sp_v3.0_unigene96158 SustainPine v3.0 416
• AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Spermatophyta RepID=Q2TUM9_9CONI 0.0
• FL-Next: sp=DNA-directed RNA polymerase subunit beta''; Agathis australis (Kauri) (Dammara australis). Plastid; Chloroplast. 0.0
• Sma3: DNA-directed RNA polymerase 5.497e-32
Internal
sp_v3.0_unigene108173 SustainPine v3.0 201
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RSV5_PHYPA 4.0e-14
• FL-Next: sp=DNA-directed RNA polymerase; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene114277 SustainPine v3.0 382
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RSV5_PHYPA 1.99993e-41
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 1.086e-10
Putative N-terminus
sp_v3.0_unigene114847 SustainPine v3.0 380
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TI03_VITVI 2.0e-39
• FL-Next: sp=DNA-directed RNA polymerase; Pinus taiwanensis. Plastid; Chloroplast. 0.0
• Sma3: DNA-directed RNA polymerase 1.032e-34
Internal
sp_v3.0_unigene115291 SustainPine v3.0 239
• AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Spermatophyta RepID=Q2TUM9_9CONI 5.0e-31
• FL-Next: sp=DNA-directed RNA polymerase; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Sma3: DNA-directed RNA polymerase 2.481e-22
Internal
sp_v3.0_unigene162932 SustainPine v3.0 333
• AutoFact: DNA-directed RNA polymerase n=2 Tax=Selaginella moellendorffii RepID=D8SQN3_SELML 1.4013e-45
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 2.96e-18
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain