Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA polymerase Rpb1, domain 6

Term: IPR007075  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene139 SustainPine v3.0 5175
AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RSV5_PHYPA 0.0
FL-Next: sp=DNA-directed RNA polymerase; Pseudotsuga menziesii var. menziesii. Plastid; Chloroplast. 0.0
Sma3: DNA-directed RNA polymerase 4.286e-38
Complete
sp_v3.0_unigene2815 SustainPine v3.0 6319
AutoFact: DNA-directed RNA polymerase n=37 Tax=Spermatophyta RepID=C5YGY9_SORBI 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 0.0
Complete
sp_v3.0_unigene24913 SustainPine v3.0 646
Sma3: DNA-directed RNA polymerase 1.046e-11
unknown
sp_v3.0_unigene26528 SustainPine v3.0 566
AutoFact: DNA-directed RNA polymerase n=117 Tax=Hypocreomycetidae RepID=E9ELZ9_METAR 1.0e-14
Sma3: DNA-directed RNA polymerase 3.893e-19
coding
sp_v3.0_unigene39929 SustainPine v3.0 164
AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Spermatophyta RepID=E0CQW1_VITVI 1.0e-18
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 3.08e-13
Internal
sp_v3.0_unigene43958 SustainPine v3.0 487
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max RepID=Q99368_SOYBN 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 9.971e-22
Internal
sp_v3.0_unigene44586 SustainPine v3.0 424
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Pinus nigra RepID=Q2TUP3_9CONI 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 0.0
Internal
sp_v3.0_unigene44642 SustainPine v3.0 312
AutoFact: Herpes_BLLF1 multi-domain protein 2.0e-07
Sma3: DNA-directed RNA polymerase 9.64e-20
coding
sp_v3.0_unigene46806 SustainPine v3.0 165
AutoFact: DNA-directed RNA polymerase n=3 Tax=Magnoliophyta RepID=B9FZ51_ORYSJ 2.0e-15
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 3.813e-08
Internal
sp_v3.0_unigene55939 SustainPine v3.0 186
AutoFact: DNA-directed RNA polymerase n=1 Tax=Selaginella moellendorffii RepID=D8SDS6_SELML 6.0e-22
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 0.0
Internal
sp_v3.0_unigene57245 SustainPine v3.0 129
AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Spermatophyta RepID=E0CQW1_VITVI 2.0e-08
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 3.347e-27
Internal
sp_v3.0_unigene58858 SustainPine v3.0 316
AutoFact: DNA-directed RNA polymerase n=6 Tax=core eudicotyledons RepID=B9SXC0_RICCO 6.0e-35
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 1.134e-21
Internal
sp_v3.0_unigene63585 SustainPine v3.0 209
AutoFact: DNA-directed RNA polymerase (Fragment) n=3 Tax=Gnetopsida RepID=Q2TUN5_EPHVI 2.0e-21
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 1.449e-23
Internal
sp_v3.0_unigene68281 SustainPine v3.0 198
AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Spermatophyta RepID=E0CQW1_VITVI 1.0e-20
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 5.553e-12
Internal
sp_v3.0_unigene69536 SustainPine v3.0 184
AutoFact: DNA-directed RNA polymerase n=37 Tax=Spermatophyta RepID=C5YGY9_SORBI 3.0e-20
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 3.761e-22
Internal
sp_v3.0_unigene73982 SustainPine v3.0 496
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Marasmius alliaceus RepID=Q5I2D9_9AGAR 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit beta''; Nageia nagi. Plastid; Chloroplast. 0.0
Sma3: DNA-directed RNA polymerase 0.0
Internal
sp_v3.0_unigene85223 SustainPine v3.0 352
AutoFact: Caudal_act multi-domain protein 5.0e-06
Sma3: DNA-directed RNA polymerase 6.888e-19
coding
sp_v3.0_unigene85291 SustainPine v3.0 323
AutoFact: Herpes_BLLF1 multi-domain protein 6.0e-09
Sma3: DNA-directed RNA polymerase 6.813e-20
coding
sp_v3.0_unigene85910 SustainPine v3.0 233
AutoFact: DUF605 multi-domain protein 2.0e-06
Sma3: DNA-directed RNA polymerase 1.97e-19
coding
sp_v3.0_unigene86121 SustainPine v3.0 334
AutoFact: DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=Q0DKN9_ORYSJ 0.0001
coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain