Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, MYND-type

Term: IPR002893  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene35273 SustainPine v3.0 754
• AutoFact: zinc finger (MYND type) family protein / F-box family protein [Arabidopsis thaliana] sp|Q9FYF9.1|FB76_ARATH RecName: Full=F-box protein At1g67340 gb|AAG00241.1|AC002130_6 F1N21.16 [Arabidopsis thaliana] gb|AAL14418.1| At1g67340/F1N21_16 [Arabidopsis thali 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene41246 SustainPine v3.0 424
• AutoFact: uncharacterized protein [Arabidopsis thaliana] emb|CAA17156.1| hypothetical protein [Arabidopsis thaliana] emb|CAB79144.1| hypothetical protein [Arabidopsis thaliana] gb|AAX22254.1| At4g21890 [Arabidopsis thaliana] gb|ABF82621.1| At4g21890 [Arabidopsis th 5.0e-14
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Putative uncharacterized protein T8O5.100 7.31e-06
N-terminus
sp_v3.0_unigene49067 SustainPine v3.0 192
• AutoFact: putative MYND finger protein [Oryza sativa Japonica Group] gb|ABF98445.1| MYND finger family protein, expressed [Oryza sativa Japonica Group] 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene58829 SustainPine v3.0 434
• AutoFact: zf-MYND domain containing protein 6.0e-10
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: cDNA clone:J023091N20, full insert sequence 6.335e-06
N-terminus
sp_v3.0_unigene64839 SustainPine v3.0 155
• AutoFact: Ubiquitin carboxyl-terminal hydrolase 19 n=4 Tax=Arabidopsis RepID=UBP19_ARATH 3.0e-07
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene70202 SustainPine v3.0 362
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene72918 SustainPine v3.0 237
• AutoFact: zinc finger (MYND type) family protein / F-box family protein [Arabidopsis thaliana] sp|Q9FYF9.1|FB76_ARATH RecName: Full=F-box protein At1g67340 gb|AAG00241.1|AC002130_6 F1N21.16 [Arabidopsis thaliana] gb|AAL14418.1| At1g67340/F1N21_16 [Arabidopsis thali 7.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene76296 SustainPine v3.0 257
• AutoFact: putative MYND finger protein [Oryza sativa Japonica Group] gb|ABF98445.1| MYND finger family protein, expressed [Oryza sativa Japonica Group] 1.0e-17
• FL-Next: sp=Histone-lysine N-methyltransferase ASHR1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Histone-lysine N-methyltransferase ASHR1 9.88e-10
Internal
sp_v3.0_unigene93871 SustainPine v3.0 2257
• AutoFact: Os02g0244300 protein n=3 Tax=Oryza sativa RepID=Q0E2F9_ORYSJ 0.0
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative ubiquitin-specific protease 7.917e-11
Putative C-terminus
sp_v3.0_unigene95175 SustainPine v3.0 1164
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene106717 SustainPine v3.0 347
• AutoFact: zinc finger (MYND type) family protein / F-box family protein [Arabidopsis thaliana] sp|Q9FYF9.1|FB76_ARATH RecName: Full=F-box protein At1g67340 gb|AAG00241.1|AC002130_6 F1N21.16 [Arabidopsis thaliana] gb|AAL14418.1| At1g67340/F1N21_16 [Arabidopsis thali 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene107643 SustainPine v3.0 395
• AutoFact: Ubiquitin carboxyl-terminal hydrolase 15 n=3 Tax=Arabidopsis RepID=UBP15_ARATH 0.0
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 15; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative ubiquitin-specific protease 5.444e-11
Internal
sp_v3.0_unigene108993 SustainPine v3.0 327
• AutoFact: Os06g0654000 protein (Fragment) n=4 Tax=Oryza sativa RepID=Q0DAG6_ORYSJ 5.00264e-43
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative ubiquitin-specific protease 3.756e-11
Internal
sp_v3.0_unigene114468 SustainPine v3.0 374
• AutoFact: putative ubiquitin-specific protease 15 [Oryza sativa Japonica Group] dbj|BAD37542.1| putative ubiquitin-specific protease 15 [Oryza sativa Japonica Group] 3.0e-31
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 15; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Cysteine-type endopeptidase, putative 4.761e-08
Internal
sp_v3.0_unigene121679 SustainPine v3.0 376
• AutoFact: ubiquitin carboxyl-terminal hydrolase 16 [Arabidopsis thaliana] sp|Q9SB51.1|UBP16_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 16; AltName: Full=Deubiquitinating enzyme 16; Short=AtUBP16; AltName: Full=Ubiquitin thiolesterase 16; AltName: Ful 4.0e-13
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 16; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative ubiquitin-specific protease 1.577e-08
N-terminus
sp_v3.0_unigene121855 SustainPine v3.0 117
• AutoFact: putative ubiquitin-specific protease 15 [Oryza sativa Japonica Group] dbj|BAD37542.1| putative ubiquitin-specific protease 15 [Oryza sativa Japonica Group] 5.0e-09
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 18; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: AT2G24640 protein 1.032e-08
Internal
sp_v3.0_unigene122505 SustainPine v3.0 157
• AutoFact: ubiquitin carboxyl-terminal hydrolase 17 [Arabidopsis thaliana] sp|Q9FKP5.1|UBP17_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17; AltName: Full=Deubiquitinating enzyme 17; Short=AtUBP17; AltName: Full=Ubiquitin thiolesterase 17; AltName: Ful 3.0e-15
• FL-Next: Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 17 OS=Arabidopsis thaliana GN=UBP17 0.0
Internal
sp_v3.0_unigene123645 SustainPine v3.0 282
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene130450 SustainPine v3.0 335
• AutoFact: Metallothio multi-domain protein 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene130654 SustainPine v3.0 294
• AutoFact: ubiquitin carboxyl-terminal hydrolase 18 [Arabidopsis thaliana] sp|Q67XW5.2|UBP18_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 18; AltName: Full=Deubiquitinating enzyme 18; Short=AtUBP18; AltName: Full=Ubiquitin thiolesterase 18; AltName: Ful 8.0e-25
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 18; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative ubiquitin-specific protease 3.187e-11
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain