|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
sp_v3.0_unigene42652
|
SustainPine v3.0
|
351
|
|
• AutoFact: Copia-type polyprotein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCE4_CUCME
|
1.0e-25
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
2.475e-19
|
|
Internal
|
|
sp_v3.0_unigene43615
|
SustainPine v3.0
|
176
|
|
• AutoFact: GK15001 gene product from transcript GK15001-RA
|
3.0e-11
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene43797
|
SustainPine v3.0
|
149
|
|
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA
|
8.0e-14
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
4.085e-09
|
|
Internal
|
|
sp_v3.0_unigene45737
|
SustainPine v3.0
|
188
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
2.973e-10
|
|
Internal
|
|
sp_v3.0_unigene45897
|
SustainPine v3.0
|
1089
|
|
• AutoFact: Gag/pol polyprotein n=3 Tax=Pisum sativum RepID=Q6WAY3_PEA
|
0.0
|
|
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion.
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, unclassified
|
1.246e-14
|
|
Putative Complete
|
|
sp_v3.0_unigene45898
|
SustainPine v3.0
|
1536
|
|
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H n=2 Tax=Medicago truncatula RepID=A2Q2J0_MEDTR
|
0.0
|
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, unclassified
|
7.98e-26
|
|
Putative Complete
|
|
sp_v3.0_unigene46139
|
SustainPine v3.0
|
351
|
|
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H n=2 Tax=Medicago truncatula RepID=A2Q2J0_MEDTR
|
6.0e-31
|
|
• FL-Next: tr=RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H; Medicago truncatula (Barrel medic) (Medicago tribuloides).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, unclassified
|
4.45e-25
|
|
Internal
|
|
sp_v3.0_unigene47701
|
SustainPine v3.0
|
665
|
|
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Sma3: Gag-Pol polyprotein
|
8.708e-08
|
|
C-terminus
|
|
sp_v3.0_unigene47780
|
SustainPine v3.0
|
722
|
|
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.921e-17
|
|
Internal
|
|
sp_v3.0_unigene47966
|
SustainPine v3.0
|
848
|
|
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
4.2039e-45
|
|
N-terminus
|
|
sp_v3.0_unigene49816
|
SustainPine v3.0
|
249
|
|
• AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME
|
6.0e-20
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
3.511e-14
|
|
Internal
|
|
sp_v3.0_unigene50154
|
SustainPine v3.0
|
300
|
|
• AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA
|
9.0e-29
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
6.954e-13
|
|
Internal
|
|
sp_v3.0_unigene51082
|
SustainPine v3.0
|
208
|
|
• AutoFact: GK15001 gene product from transcript GK15001-RA
|
1.0e-11
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene51673
|
SustainPine v3.0
|
306
|
|
• AutoFact: Unassigned protein
|
3.0e-30
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
2.471e-10
|
|
Internal
|
|
sp_v3.0_unigene51717
|
SustainPine v3.0
|
261
|
|
• AutoFact: Reverse Transcriptase (Fragment) n=2 Tax=Picea abies RepID=O49916_PICAB
|
3.0e-28
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Sma3: Reverse transcriptase
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene51932
|
SustainPine v3.0
|
335
|
|
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H n=2 Tax=Medicago truncatula RepID=A2Q2J0_MEDTR
|
2.0e-29
|
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, unclassified
|
1.81e-15
|
|
Putative N-terminus
|
|
sp_v3.0_unigene52126
|
SustainPine v3.0
|
351
|
|
• AutoFact: Reverse transcriptase (Fragment) n=4 Tax=Ginkgo biloba RepID=Q06290_GINBI
|
2.0e-30
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Reverse transcriptase
|
1.788e-21
|
|
Internal
|
|
sp_v3.0_unigene52276
|
SustainPine v3.0
|
435
|
|
• AutoFact: Putative gag-pol polyprotein n=1 Tax=Fragaria x ananassa RepID=C6GFP7_FRAAN
|
2.0e-38
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.411e-16
|
|
Internal
|
|
sp_v3.0_unigene52405
|
SustainPine v3.0
|
357
|
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU
|
1.0e-29
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
3.218e-30
|
|
Internal
|
|
sp_v3.0_unigene52795
|
SustainPine v3.0
|
478
|
|
• AutoFact: GK15001 n=1 Tax=Drosophila willistoni RepID=B4MVS9_DROWI
|
7.0e-28
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Internal
|
