Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Repetitive proline-rich cell wall protein repeat

Term: IPR003883  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene37154 SustainPine v3.0 1040
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7TJC2_VITVI 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene39503 SustainPine v3.0 242
AutoFact: leucine-rich repeat extensin-like protein 3 [Arabidopsis thaliana] sp|Q9T0K5.1|LRX3_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 3; Short=AtLRX3; Short=LRR/EXTENSIN3; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 7.0e-24
FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
Sma3: Extensin-like protein 1.527e-14
Internal
sp_v3.0_unigene40653 SustainPine v3.0 414
AutoFact: leucine-rich repeat extensin-like protein 4 [Arabidopsis thaliana] sp|Q9LHF1.1|LRX4_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 4; Short=AtLRX4; Short=LRR/EXTENSIN4; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Extensin-like protein 7.47e-29
Putative N-terminus
sp_v3.0_unigene42177 SustainPine v3.0 219
AutoFact: Pollen-specific leucine-rich repeat extensin-like protein 3 n=2 Tax=Arabidopsis RepID=PLRX3_ARATH 6.0e-19
FL-Next: sp=Pollen-specific leucine-rich repeat extensin-like protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Extensin-like protein 1.573e-24
Internal
sp_v3.0_unigene49119 SustainPine v3.0 1357
AutoFact: Atrophin-1 multi-domain protein 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Extensin 5.604e-35
Complete
sp_v3.0_unigene49501 SustainPine v3.0 197
AutoFact: Extensin-like protein n=2 Tax=Arabidopsis RepID=O49448_ARATH 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Extensin-like protein 2.105e-23
Internal
sp_v3.0_unigene65990 SustainPine v3.0 316
AutoFact: Proline-rich-like protein n=1 Tax=Asparagus officinalis RepID=Q96232_ASPOF 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative proline-rich protein 1.095e-06
C-terminus
sp_v3.0_unigene69720 SustainPine v3.0 188
AutoFact: Leucine-rich repeat/extensin n=2 Tax=Nicotiana RepID=A3KD20_NICPL 7.0e-10
FL-Next: sp=Leucine-rich repeat extensin-like protein 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Extensin-like protein 3.675e-12
Internal
sp_v3.0_unigene82534 SustainPine v3.0 406
AutoFact: Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A7S7R9_NEMVE 4.0e-05
Sma3: Repetitive proline-rich cell wall protein 1 1.248e-09
coding
sp_v3.0_unigene82975 SustainPine v3.0 268
AutoFact: Extensin_2 multi-domain protein 9.0e-11
Sma3: Proline-rich protein 3.494e-13
coding
sp_v3.0_unigene83367 SustainPine v3.0 294
AutoFact: Drf_FH1 multi-domain protein 2.0e-14
Sma3: Extensin 1.357e-22
coding
sp_v3.0_unigene83369 SustainPine v3.0 302
AutoFact: Drf_FH1 multi-domain protein 3.0e-13
Sma3: Proline-rich protein 3.074e-17
coding
sp_v3.0_unigene85465 SustainPine v3.0 319
AutoFact: Extensin_2 multi-domain protein 6.0e-13
Sma3: Proline-rich protein 1.528e-10
coding
sp_v3.0_unigene86147 SustainPine v3.0 265
AutoFact: Extensin_2 multi-domain protein 6.0e-13
Sma3: Extensin 1.555e-24
coding
sp_v3.0_unigene86832 SustainPine v3.0 410
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7U598_VITVI 6.0e-07
Sma3: Extensin 3.391e-22
coding
sp_v3.0_unigene86928 SustainPine v3.0 340
AutoFact: Extensin_2 multi-domain protein 4.0e-12
Sma3: Extensin 1.85e-18
coding
sp_v3.0_unigene87528 SustainPine v3.0 386
AutoFact: Atrophin-1 multi-domain protein 6.0e-09
putative_coding
sp_v3.0_unigene95574 SustainPine v3.0 573
AutoFact: leucine-rich repeat/extensin [Nicotiana plumbaginifolia] dbj|BAF48664.1| leucine-rich repeat/extensin [Nicotiana plumbaginifolia] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Extensin-like protein 4.04e-31
Internal
sp_v3.0_unigene95763 SustainPine v3.0 438
AutoFact: Extensin_2 multi-domain protein 9.0e-14
Sma3: Extensin 6.665e-32
unknown
sp_v3.0_unigene102149 SustainPine v3.0 594
AutoFact: heavy-metal-associated domain-containing protein [Arabidopsis thaliana] gb|ABN04757.1| At1g23000 [Arabidopsis thaliana] gb|AEE30320.1| heavy-metal-associated domain-containing protein [Arabidopsis thaliana] 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chloroplast-targeted copper chaperone, putative 2.581e-18
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain