|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
sp_v3.0_unigene149924
|
SustainPine v3.0
|
216
|
|
• AutoFact: Integrase n=1 Tax=Boechera divaricarpa RepID=B6REL8_9BRAS
|
2.0e-18
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, unclassified
|
2.781e-14
|
|
Internal
|
|
sp_v3.0_unigene150816
|
SustainPine v3.0
|
457
|
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
1.0e-32
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Copia-type polyprotein
|
3.769e-11
|
|
Internal
|
|
sp_v3.0_unigene153588
|
SustainPine v3.0
|
434
|
|
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH
|
1.0e-35
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
5.106e-18
|
|
Internal
|
|
sp_v3.0_unigene155532
|
SustainPine v3.0
|
335
|
|
• AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA
|
5.0e-27
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
5.652e-17
|
|
Internal
|
|
sp_v3.0_unigene159748
|
SustainPine v3.0
|
442
|
|
• AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA
|
7.0e-29
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
3.97e-37
|
|
Internal
|
|
sp_v3.0_unigene159832
|
SustainPine v3.0
|
485
|
|
• AutoFact: Gag-pol polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3Y5_SOLDE
|
4.0e-36
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
8.359e-16
|
|
Internal
|
|
sp_v3.0_unigene160443
|
SustainPine v3.0
|
364
|
|
• AutoFact: Gag-pol polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3Y5_SOLDE
|
3.0e-28
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.933e-16
|
|
Internal
|
|
sp_v3.0_unigene160519
|
SustainPine v3.0
|
473
|
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
2.0e-31
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Copia-type polyprotein
|
5.223e-11
|
|
Internal
|
|
sp_v3.0_unigene160689
|
SustainPine v3.0
|
279
|
|
• AutoFact: Reverse transcriptase (Fragment) n=4 Tax=Ginkgo biloba RepID=Q06290_GINBI
|
6.0e-32
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Reverse transcriptase
|
2.602e-24
|
|
Internal
|
|
sp_v3.0_unigene160721
|
SustainPine v3.0
|
462
|
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU
|
2.0e-30
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
9.386e-30
|
|
Internal
|
|
sp_v3.0_unigene160802
|
SustainPine v3.0
|
423
|
|
• AutoFact: potassium transporter [Phragmites australis]
|
1.0e-12
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Potassium transporter
|
1.228e-06
|
|
C-terminus
|
|
sp_v3.0_unigene160847
|
SustainPine v3.0
|
452
|
|
• AutoFact: copia-like retrotransposable element [Arabidopsis thaliana]
|
4.0e-31
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.13e-19
|
|
Internal
|
|
sp_v3.0_unigene160850
|
SustainPine v3.0
|
275
|
|
• AutoFact: OSJNBa0019K04.23 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XTX5_ORYSJ
|
8.0e-25
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, unclassified
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene161195
|
SustainPine v3.0
|
424
|
|
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA
|
3.0e-28
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
7.054e-17
|
|
Internal
|
|
sp_v3.0_unigene161226
|
SustainPine v3.0
|
404
|
|
• AutoFact: Os01g0116166 protein n=1 Tax=Oryza sativa Japonica Group RepID=C7IXI0_ORYSJ
|
6.0e-30
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
6.758e-21
|
|
Internal
|
|
sp_v3.0_unigene161240
|
SustainPine v3.0
|
316
|
|
• AutoFact: Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic n=1 Tax=Medicago truncatula RepID=Q2HU05_MEDTR
|
1.0e-26
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
6.71222e-43
|
|
Internal
|
|
sp_v3.0_unigene161261
|
SustainPine v3.0
|
437
|
|
• AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH
|
4.00001e-41
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
3.327e-36
|
|
Internal
|
|
sp_v3.0_unigene161473
|
SustainPine v3.0
|
236
|
|
• AutoFact: Reverse transcriptase (Fragment) n=4 Tax=Ginkgo biloba RepID=Q06290_GINBI
|
1.0e-24
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Reverse transcriptase
|
1.232e-19
|
|
Internal
|
|
sp_v3.0_unigene161538
|
SustainPine v3.0
|
402
|
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB
|
7.0e-31
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
3.46e-26
|
|
Internal
|
|
sp_v3.0_unigene161563
|
SustainPine v3.0
|
387
|
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
6.0e-36
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.807e-19
|
|
Internal
|
