Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
sp_v3.0_unigene149526
|
SustainPine v3.0
|
228
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB
|
9.0e-23
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
0.0
|
|
Internal
|
sp_v3.0_unigene149670
|
SustainPine v3.0
|
320
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY11_PICAB
|
2.0e-30
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.346e-27
|
|
Internal
|
sp_v3.0_unigene149681
|
SustainPine v3.0
|
311
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB
|
3.0e-31
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
2.529e-34
|
|
Internal
|
sp_v3.0_unigene149707
|
SustainPine v3.0
|
310
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU
|
2.0e-32
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Reverse transcriptase
|
4.015e-25
|
|
Internal
|
sp_v3.0_unigene149774
|
SustainPine v3.0
|
428
|
• AutoFact: T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH
|
3.00018e-42
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
7.028e-13
|
|
Internal
|
sp_v3.0_unigene149924
|
SustainPine v3.0
|
216
|
• AutoFact: Integrase n=1 Tax=Boechera divaricarpa RepID=B6REL8_9BRAS
|
2.0e-18
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
2.781e-14
|
|
Internal
|
sp_v3.0_unigene150147
|
SustainPine v3.0
|
321
|
• AutoFact: copia-type polyprotein [Arabidopsis thaliana]
|
2.0e-24
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Internal
|
sp_v3.0_unigene157663
|
SustainPine v3.0
|
359
|
• AutoFact: Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max RepID=B5U9F7_SOYBN
|
0.0
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.433e-30
|
|
Internal
|
sp_v3.0_unigene158377
|
SustainPine v3.0
|
320
|
• AutoFact: Pescadillo-like protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0NK35_PHYIT
|
2.0e-17
|
• FL-Next: sp=Pescadillo homolog; Chlamydomonas reinhardtii (Chlamydomonas smithii).
|
0.0
|
• Sma3: Pescadillo, putative
|
9.26e-06
|
|
Internal
|
sp_v3.0_unigene159563
|
SustainPine v3.0
|
417
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
3.0e-31
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
2.06e-11
|
|
Internal
|
sp_v3.0_unigene159581
|
SustainPine v3.0
|
412
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY11_PICAB
|
1.0e-31
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
0.0
|
|
Internal
|
sp_v3.0_unigene159734
|
SustainPine v3.0
|
309
|
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ
|
7.0e-26
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
4.542e-13
|
|
Internal
|
sp_v3.0_unigene159773
|
SustainPine v3.0
|
423
|
• AutoFact: GK15001 gene product from transcript GK15001-RA
|
1.0e-25
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Copia-type polyprotein
|
1.351e-07
|
|
Internal
|
sp_v3.0_unigene159832
|
SustainPine v3.0
|
485
|
• AutoFact: Gag-pol polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3Y5_SOLDE
|
4.0e-36
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
8.359e-16
|
|
Internal
|
sp_v3.0_unigene159940
|
SustainPine v3.0
|
491
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
1.0e-38
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
4.521e-36
|
|
N-terminus
|
sp_v3.0_unigene160076
|
SustainPine v3.0
|
493
|
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q6AUP9_ORYSJ
|
7.0e-29
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
2.11e-09
|
|
Internal
|
sp_v3.0_unigene160084
|
SustainPine v3.0
|
342
|
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH
|
6.0e-25
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Copia-type polyprotein
|
2.245e-08
|
|
Internal
|
sp_v3.0_unigene160116
|
SustainPine v3.0
|
323
|
• AutoFact: rve domain containing protein
|
8.0e-15
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
8.834e-17
|
|
Internal
|
sp_v3.0_unigene160187
|
SustainPine v3.0
|
430
|
• AutoFact: RVT_2 domain containing protein
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
3.932e-34
|
|
Internal
|
sp_v3.0_unigene160328
|
SustainPine v3.0
|
447
|
• AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME
|
3.0e-33
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Putative C-terminus
|