Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: BRCT domain

Term: IPR001357  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene19 SustainPine v3.0 5577
AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene56 SustainPine v3.0 2179
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.569e-23
C-terminus
sp_v3.0_unigene58 SustainPine v3.0 4280
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative polyprotein 6.696e-12
Complete
sp_v3.0_unigene172 SustainPine v3.0 1301
AutoFact: BRCT domain-containing DNA repair protein [Arabidopsis thaliana] gb|AAT68748.1| hypothetical protein At3g43930 [Arabidopsis thaliana] gb|AEE77846.1| BRCT domain-containing DNA repair protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Topbp1, putative; Ricinus communis (Castor bean). 0.0
Putative N-terminus
sp_v3.0_unigene615 SustainPine v3.0 2514
AutoFact: GCN5-related N-acetyltransferase; BRCT [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative Complete
sp_v3.0_unigene681 SustainPine v3.0 1639
AutoFact: RVT_2 domain containing protein 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 8.754e-19
C-terminus
sp_v3.0_unigene1030 SustainPine v3.0 3717
AutoFact: Enhanced disease resistance 1 n=1 Tax=Delphinium 'MagicFountains dark blue' RepID=Q76BL0_9MAGN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Map3k delta-1 protein kinase, putative 1.629e-25
Complete
sp_v3.0_unigene1564 SustainPine v3.0 486
AutoFact: Unassigned protein
FL-Next: sp=BRCT domain-containing protein At4g02110; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene1591 SustainPine v3.0 3352
AutoFact: Protein kinase [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Map3k delta-1 protein kinase, putative 2.053e-25
Complete
sp_v3.0_unigene1810 SustainPine v3.0 1955
AutoFact: putative poly (ADP-ribose) polymerase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Poly[ADP-ribose] synthetase 1 7.814e-13
Complete
sp_v3.0_unigene2451 SustainPine v3.0 2490
AutoFact: Poly [ADP-ribose] polymerase 3 n=1 Tax=Glycine max RepID=PARP3_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Poly[ADP-ribose] synthetase 3 2.392e-17
Putative Complete
sp_v3.0_unigene2829 SustainPine v3.0 1410
AutoFact: Unassigned protein
FL-Next: tr=Nibrin; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Nibrin, putative 2.924e-06
C-terminus
sp_v3.0_unigene2903 SustainPine v3.0 1761
AutoFact: pescadillo-like protein [Zinnia violacea] 0.0
FL-Next: sp=Pescadillo homolog; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Sma3: Pescadillo-like protein 4.689e-14
Putative C-terminus
sp_v3.0_unigene2916 SustainPine v3.0 379
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 3.0e-32
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Reverse transcriptase 7.098e-36
Internal
sp_v3.0_unigene4007 SustainPine v3.0 1829
AutoFact: [K] COG5190 TFIIF-interacting CTD phosphatases, including NLI-interacting factor 6.0e-16
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: RNA polymerase II ctd phosphatase, putative 2.807e-08
C-terminus
sp_v3.0_unigene4489 SustainPine v3.0 603
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Putative polyprotein 1.103e-09
C-terminus
sp_v3.0_unigene4510 SustainPine v3.0 475
AutoFact: Terminal deoxycytidyl transferase rev1, putative n=1 Tax=Ricinus communis RepID=B9RY76_RICCO 2.0e-33
FL-Next: Isoform 3 of DNA repair protein REV1 OS=Arabidopsis thaliana GN=REV1 0.0
Internal
sp_v3.0_unigene4854 SustainPine v3.0 261
AutoFact: RNA polymerase II C-terminal domain phosphatase-like 4 [Arabidopsis thaliana] sp|Q00IB6.1|CPL4_ARATH RecName: Full=RNA polymerase II C-terminal domain phosphatase-like 4; Short=FCP-like 4; AltName: Full=Carboxyl-terminal phosphatase-like 4; Short=AtCPL4; 5.0e-19
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene5650 SustainPine v3.0 2257
AutoFact: putative BRCT domain-containing protein [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Protein BREAST CANCER SUSCEPTIBILITY 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Brca1 associated ring domain, putative 5.669e-09
C-terminus
sp_v3.0_unigene5977 SustainPine v3.0 1743
AutoFact: Replication factor C large subunit (Fragment) n=2 Tax=Poaceae RepID=Q8L6A5_9POAL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain