Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, BED-type predicted

Term: IPR003656  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene98188 SustainPine v3.0 382
AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene98370 SustainPine v3.0 375
AutoFact: DUF659 domain containing protein 6.0e-14
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene98491 SustainPine v3.0 528
AutoFact: Unassigned protein
FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene98601 SustainPine v3.0 531
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Transposase-like protein 3.426e-06
Internal
sp_v3.0_unigene98715 SustainPine v3.0 1406
AutoFact: 60S ribosomal protein L10 n=2 Tax=Pinaceae RepID=RL10_PINTA 2.0e-33
FL-Next: sp=60S ribosomal protein L10; Pinus taeda (Loblolly pine). 0.0
Sma3: 60S ribosomal protein L10 9.956e-17
Putative Complete
sp_v3.0_unigene99033 SustainPine v3.0 402
AutoFact: putative cyclin-dependent protein kinase [Arabidopsis thaliana] gb|AAO64868.1| At5g50860 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CDKC 1.379e-15
Internal
sp_v3.0_unigene99160 SustainPine v3.0 420
AutoFact: Os02g0513700 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0E0X9_ORYSJ 3.0e-28
FL-Next: tr=Uncharacterized protein; Oryza glaberrima (African rice). 0.0
Sma3: Os02g0513700 protein 3.411e-06
Internal
sp_v3.0_unigene99231 SustainPine v3.0 274
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene100252 SustainPine v3.0 267
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene100649 SustainPine v3.0 469
AutoFact: RecName: Full=Pleiotropic drug resistance protein 1; AltName: Full=NpPDR1 emb|CAC40990.1| ABC1 protein [Nicotiana plumbaginifolia] 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-binding cassette transporter, putative 0.0
Internal
sp_v3.0_unigene100726 SustainPine v3.0 455
AutoFact: RecName: Full=Pleiotropic drug resistance protein 12 dbj|BAD53545.1| PDR-like ABC transporter [Oryza sativa Japonica Group] gb|EEE65874.1| hypothetical protein OsJ_21675 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-binding cassette transporter, putative 0.0
C-terminus
sp_v3.0_unigene101098 SustainPine v3.0 210
AutoFact: HAT family dimerisation domain containing protein n=2 Tax=Oryza sativa RepID=Q2R1C3_ORYSJ 5.0e-16
FL-Next: tr=Uncharacterized protein; Oryza glaberrima (African rice). 0.0
Internal
sp_v3.0_unigene101547 SustainPine v3.0 603
AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9SRE5_RICCO 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-binding cassette transporter, putative 4.282e-28
Internal
sp_v3.0_unigene102120 SustainPine v3.0 998
AutoFact: Cell division protein kinase, putative n=1 Tax=Ricinus communis RepID=B9T5N4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CDKC 2.483e-16
Internal
sp_v3.0_unigene102464 SustainPine v3.0 878
AutoFact: Probable pleiotropic drug resistance protein 1 n=6 Tax=Oryza sativa RepID=PDR1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-binding cassette transporter, putative 0.0
Putative C-terminus
sp_v3.0_unigene102506 SustainPine v3.0 678
AutoFact: Dimer_Tnp_hAT domain containing protein 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HAT family dimerisation domain containing protein 1.443e-07
Putative C-terminus
sp_v3.0_unigene102606 SustainPine v3.0 449
AutoFact: Unassigned protein 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene102941 SustainPine v3.0 572
AutoFact: ATP/DNA binding protein [Arabidopsis thaliana] emb|CAB87905.1| hypothetical protein [Arabidopsis thaliana] gb|AEE78454.1| ATP/DNA binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein Sb05g018510; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 1.005e-06
Internal
sp_v3.0_unigene103048 SustainPine v3.0 519
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene103199 SustainPine v3.0 538
AutoFact: HAT family dimerization domain-containing protein n=1 Tax=Arabidopsis thaliana RepID=F4KHA1_ARATH 7.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain