Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Extensin repeat

Term: IPR006706  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene159487 SustainPine v3.0 189
• AutoFact: Leucine-rich repeat extensin-like protein 4 n=2 Tax=Arabidopsis RepID=LRX4_ARATH 6.0e-15
• FL-Next: sp=Leucine-rich repeat extensin-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Extensin-like protein 1.504e-07
Internal
sp_v3.0_unigene160155 SustainPine v3.0 215
• AutoFact: Isoform 2 of Extensin-1 n=1 Tax=Arabidopsis thaliana RepID=Q38913-2 2.0e-06
• FL-Next: Isoform 2 of Extensin-1 OS=Arabidopsis thaliana GN=EXT1 0.0
• Sma3: Hydroxyproline-rich protein 2.437e-06
Putative N-terminus
sp_v3.0_unigene163269 SustainPine v3.0 375
• AutoFact: leucine-rich repeat/extensin [Nicotiana plumbaginifolia] dbj|BAF48664.1| leucine-rich repeat/extensin [Nicotiana plumbaginifolia] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Extensin-like protein 1.038e-31
Internal
sp_v3.0_unigene176031 SustainPine v3.0 361
• AutoFact: Extensin_2 multi-domain protein 3.0e-20
• Sma3: Extensin 4.527e-38
coding
sp_v3.0_unigene176305 SustainPine v3.0 259
• AutoFact: Extensin_2 multi-domain protein 4.0e-19
• Sma3: Extensin 1.122e-39
coding
sp_v3.0_unigene183594 SustainPine v3.0 614
• AutoFact: Extensin_2 multi-domain protein 4.0e-21
• Sma3: Extensin 1.54143e-44
coding
sp_v3.0_unigene185377 SustainPine v3.0 358
• AutoFact: Extensin_2 domain containing protein 5.0e-10
• Sma3: Extensin 7.805e-19
unknown
sp_v3.0_unigene188011 SustainPine v3.0 921
• AutoFact: Extensin_2 multi-domain protein 1.0e-16
• Sma3: Extensin-like protein 3.621e-19
coding
sp_v3.0_unigene189062 SustainPine v3.0 256
• AutoFact: Extensin_2 domain containing protein 3.0e-12
unknown
sp_v3.0_unigene194563 SustainPine v3.0 139
• AutoFact: Extensin_2 multi-domain protein 1.0e-16
• Sma3: Extensin 5.968e-37
unknown
sp_v3.0_unigene202127 SustainPine v3.0 988
• AutoFact: DUF1421 multi-domain protein 2.0e-18
• Sma3: Extensin 1.157e-39
coding
sp_v3.0_unigene205199 SustainPine v3.0 156
• AutoFact: Extensin_2 multi-domain protein 9.0e-18
• Sma3: Extensin 8.737e-22
unknown
sp_v3.0_unigene205626 SustainPine v3.0 233
• AutoFact: Extensin_2 multi-domain protein 8.0e-25
• Sma3: Extensin 0.0
coding
sp_v3.0_unigene205735 SustainPine v3.0 934
• AutoFact: Drf_FH1 multi-domain protein 1.0e-20
• Sma3: Extensin 4.05e-33
coding
sp_v3.0_unigene207178 SustainPine v3.0 889
• AutoFact: DUF1421 multi-domain protein 5.0e-18
• Sma3: Extensin 3.623e-22
coding
sp_v3.0_unigene207735 SustainPine v3.0 674
• AutoFact: Atrophin-1 multi-domain protein 1.0e-16
• FL-Next: sp=Putative membrane protein ycf1; Cucumis sativus (Cucumber). Plastid; Chloroplast. 0.0
• Sma3: Proline-rich protein 5.687e-10
Internal
sp_v3.0_unigene207962 SustainPine v3.0 314
• AutoFact: Extensin_2 multi-domain protein 1.0e-14
• Sma3: Extensin 4.769e-11
coding
sp_v3.0_unigene209582 SustainPine v3.0 786
• AutoFact: Extensin_2 multi-domain protein 1.0e-08
• Sma3: Hydroxyproline-rich protein 2.437e-06
coding
sp_v3.0_unigene209740 SustainPine v3.0 332
• AutoFact: Extensin_2 multi-domain protein 1.0e-07
• FL-Next: sp=Extensin-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Hydroxyproline-rich protein 2.437e-06
Internal
sp_v3.0_unigene209937 SustainPine v3.0 190
• AutoFact: LRX2, putative n=1 Tax=Ricinus communis RepID=B9RL73_RICCO 2.0e-17
• FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Extensin-like protein 6.653e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain