Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Extensin repeat

Term: IPR006706  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene127886 SustainPine v3.0 398
AutoFact: Extensin_2 multi-domain protein 3.0e-10
coding
sp_v3.0_unigene128288 SustainPine v3.0 456
AutoFact: leucine-rich repeat extensin-like protein 3 [Arabidopsis thaliana] sp|Q9T0K5.1|LRX3_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 3; Short=AtLRX3; Short=LRR/EXTENSIN3; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 8.00141e-43
FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
Sma3: Extensin-like protein 5.095e-26
Internal
sp_v3.0_unigene129064 SustainPine v3.0 504
AutoFact: Extensin_2 multi-domain protein 5.0e-12
Sma3: Extensin 2.182e-26
coding
sp_v3.0_unigene129129 SustainPine v3.0 442
AutoFact: Extensin_2 multi-domain protein 8.0e-27
Sma3: Extensin 0.0
coding
sp_v3.0_unigene132293 SustainPine v3.0 410
AutoFact: Extensin_2 multi-domain protein 4.0e-17
Sma3: Extensin 3.86e-39
coding
sp_v3.0_unigene132429 SustainPine v3.0 473
AutoFact: Extensin_2 multi-domain protein 4.0e-23
Sma3: Extensin 0.0
coding
sp_v3.0_unigene137107 SustainPine v3.0 309
AutoFact: Extensin_2 multi-domain protein 2.0e-19
Sma3: Extensin 9.475e-30
coding
sp_v3.0_unigene137531 SustainPine v3.0 242
AutoFact: Extensin_2 multi-domain protein 4.0e-21
Sma3: Extensin 1.764e-39
coding
sp_v3.0_unigene140283 SustainPine v3.0 347
AutoFact: Leucine-rich repeat extensin-like protein 4 n=2 Tax=Arabidopsis RepID=LRX4_ARATH 2.0e-26
FL-Next: sp=Leucine-rich repeat extensin-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Extensin-like protein 4.587e-09
Internal
sp_v3.0_unigene140490 SustainPine v3.0 444
AutoFact: Isoform 2 of Extensin-1 n=1 Tax=Arabidopsis thaliana RepID=Q38913-2 1.0e-09
FL-Next: Isoform 2 of Extensin-1 OS=Arabidopsis thaliana GN=EXT1 0.0
Sma3: Hydroxyproline-rich protein 2.437e-06
Putative Complete
sp_v3.0_unigene141644 SustainPine v3.0 383
AutoFact: Extensin_2 multi-domain protein 4.0e-15
Sma3: Extensin 5.438e-39
unknown
sp_v3.0_unigene142268 SustainPine v3.0 400
AutoFact: Extensin_2 domain containing protein 3.0e-14
Sma3: Extensin 1.287e-16
coding
sp_v3.0_unigene142415 SustainPine v3.0 540
AutoFact: Extensin_2 multi-domain protein 2.0e-12
Sma3: Hydroxyproline-rich protein 8.772e-06
coding
sp_v3.0_unigene143120 SustainPine v3.0 249
AutoFact: leucine-rich repeat extensin-like protein 3 [Arabidopsis thaliana] sp|Q9T0K5.1|LRX3_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 3; Short=AtLRX3; Short=LRR/EXTENSIN3; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 2.0e-16
FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Extensin-like protein 1.634e-12
Internal
sp_v3.0_unigene143149 SustainPine v3.0 387
AutoFact: Extensin_2 multi-domain protein 2.0e-16
Sma3: Extensin 5.91e-29
coding
sp_v3.0_unigene145284 SustainPine v3.0 1207
AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 4.0e-13
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Extensin 3.042e-30
C-terminus
sp_v3.0_unigene145293 SustainPine v3.0 514
AutoFact: Extensin_2 multi-domain protein 5.0e-19
Sma3: Extensin 1.388e-39
coding
sp_v3.0_unigene145371 SustainPine v3.0 472
AutoFact: Atrophin-1 multi-domain protein 1.0e-09
putative_coding
sp_v3.0_unigene145458 SustainPine v3.0 454
AutoFact: Extensin_2 domain containing protein 8.0e-14
Sma3: Extensin (Class I) 3.221e-21
coding
sp_v3.0_unigene145607 SustainPine v3.0 372
AutoFact: Extensin_2 multi-domain protein 2.0e-18
Sma3: Extensin 3.493e-39
coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain