Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Extensin repeat

Term: IPR006706  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene17400 SustainPine v3.0 1219
• AutoFact: Atrophin-1 multi-domain protein 1.0e-18
• Sma3: Extensin 1.784e-30
coding
sp_v3.0_unigene17445 SustainPine v3.0 1448
• AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 7.0e-15
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Extensin 1.447e-36
Putative C-terminus
sp_v3.0_unigene17470 SustainPine v3.0 1169
• AutoFact: DUF1421 multi-domain protein 3.0e-14
unknown
sp_v3.0_unigene17666 SustainPine v3.0 880
• AutoFact: Drf_FH1 multi-domain protein 9.0e-21
• Sma3: Extensin 2.055e-36
coding
sp_v3.0_unigene18131 SustainPine v3.0 1193
• AutoFact: Drf_FH1 multi-domain protein 3.0e-19
• Sma3: Extensin 5.115e-18
coding
sp_v3.0_unigene20751 SustainPine v3.0 824
• AutoFact: Extensin_2 multi-domain protein 3.0e-13
• Sma3: Extensin 1.071e-16
coding
sp_v3.0_unigene20968 SustainPine v3.0 596
• AutoFact: Extensin_2 multi-domain protein 1.0e-12
• Sma3: Extensin 1.997e-13
coding
sp_v3.0_unigene20986 SustainPine v3.0 396
• AutoFact: Extensin_2 multi-domain protein 2.0e-15
• Sma3: Extensin 1.438e-22
coding
sp_v3.0_unigene21232 SustainPine v3.0 981
• AutoFact: Extensin_2 multi-domain protein 2.0e-12
• Sma3: Extensin 7.353e-08
putative_coding
sp_v3.0_unigene21234 SustainPine v3.0 939
• AutoFact: DUF1421 multi-domain protein 2.0e-12
• Sma3: Extensin 2.267e-11
coding
sp_v3.0_unigene21288 SustainPine v3.0 822
• AutoFact: DUF1421 multi-domain protein 2.0e-20
• Sma3: Extensin 3.273e-30
coding
sp_v3.0_unigene21326 SustainPine v3.0 771
• AutoFact: Drf_FH1 multi-domain protein 9.0e-19
• Sma3: Extensin 2.667e-34
coding
sp_v3.0_unigene21347 SustainPine v3.0 1465
• AutoFact: DUF1421 multi-domain protein 5.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Extensin 3.432e-30
Complete
sp_v3.0_unigene21364 SustainPine v3.0 1289
• AutoFact: Atrophin-1 multi-domain protein 1.0e-28
• Sma3: Glycine-rich protein 1.328e-12
coding
sp_v3.0_unigene21488 SustainPine v3.0 999
• AutoFact: Drf_FH1 multi-domain protein 5.0e-18
• Sma3: Extensin 9.397e-29
coding
sp_v3.0_unigene21502 SustainPine v3.0 792
• AutoFact: proteophosphoglycan ppg4 [Leishmania braziliensis MHOM/BR/75/M2904] emb|CAM43270.1| proteophosphoglycan ppg4 [Leishmania braziliensis MHOM/BR/75/M2904] 2.0e-09
• FL-Next: sp=Putative membrane protein ycf1; Cucumis sativus (Cucumber). Plastid; Chloroplast. 0.0
• Sma3: Extensin 2.226e-24
Internal
sp_v3.0_unigene21513 SustainPine v3.0 603
• AutoFact: Extensin_2 multi-domain protein 4.0e-23
• Sma3: Extensin 0.0
coding
sp_v3.0_unigene21522 SustainPine v3.0 502
• AutoFact: Extensin_2 multi-domain protein 2.0e-13
• Sma3: Extensin 8.191e-28
coding
sp_v3.0_unigene26732 SustainPine v3.0 1140
• AutoFact: Extensin_2 multi-domain protein 1.0e-11
• Sma3: Extensin 1.989e-10
coding
sp_v3.0_unigene27257 SustainPine v3.0 1253
• AutoFact: PREDICTED: similar to Scale keratin (S-ker) (sKer) [Gallus gallus] 1.0e-05
• FL-Next: tr=Os06g0316300 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Extensin 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain