Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ROK

Term: IPR000600  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene16 SustainPine v3.0 3247
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glycine-rich protein 1.501e-14
Complete
sp_v3.0_unigene1707 SustainPine v3.0 1286
AutoFact: Sex determining protein n=3 Tax=Mus musculus musculus RepID=O35861_MOUSE 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed 3.394e-17
Complete
sp_v3.0_unigene1879 SustainPine v3.0 3620
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TEH2_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Extensin 3.825e-13
Complete
sp_v3.0_unigene1967 SustainPine v3.0 1085
AutoFact: Gly_rich multi-domain protein 4.0e-17
Sma3: Glycine-rich protein 4.555e-14
coding
sp_v3.0_unigene3321 SustainPine v3.0 605
AutoFact: FAP multi-domain protein 5.0e-20
Sma3: Glycine-rich protein 5.632e-13
coding
sp_v3.0_unigene10765 SustainPine v3.0 888
AutoFact: Sex determining protein n=3 Tax=Mus musculus musculus RepID=O35861_MOUSE 5.0e-20
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed 4.915e-17
Putative C-terminus
sp_v3.0_unigene15799 SustainPine v3.0 1283
AutoFact: Pollen Ole e 1 allergen and extensin [Medicago truncatula] 9.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene15973 SustainPine v3.0 595
AutoFact: GRP multi-domain protein 1.0e-09
Sma3: Putative glycine-rich cell wall structural protein 3.005e-07
putative_coding
sp_v3.0_unigene16034 SustainPine v3.0 643
AutoFact: Drf_FH1 multi-domain protein 9.0e-18
Sma3: Glycine-rich protein 9.923e-13
coding
sp_v3.0_unigene17278 SustainPine v3.0 501
AutoFact: Trypan_PARP multi-domain protein 3.0e-16
Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed 2.657e-20
coding
sp_v3.0_unigene20162 SustainPine v3.0 1980
AutoFact: proline-rich protein [Solanum tuberosum] 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Proline-rich protein 4.151e-11
Putative Complete
sp_v3.0_unigene20553 SustainPine v3.0 436
AutoFact: FAP multi-domain protein 1.0e-15
Sma3: Glycine-rich protein 7.373e-14
coding
sp_v3.0_unigene21347 SustainPine v3.0 1465
AutoFact: DUF1421 multi-domain protein 5.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Extensin 3.432e-30
Complete
sp_v3.0_unigene21364 SustainPine v3.0 1289
AutoFact: Atrophin-1 multi-domain protein 1.0e-28
Sma3: Glycine-rich protein 1.328e-12
coding
sp_v3.0_unigene21502 SustainPine v3.0 792
AutoFact: proteophosphoglycan ppg4 [Leishmania braziliensis MHOM/BR/75/M2904] emb|CAM43270.1| proteophosphoglycan ppg4 [Leishmania braziliensis MHOM/BR/75/M2904] 2.0e-09
FL-Next: sp=Putative membrane protein ycf1; Cucumis sativus (Cucumber). Plastid; Chloroplast. 0.0
Sma3: Extensin 2.226e-24
Internal
sp_v3.0_unigene22420 SustainPine v3.0 1101
AutoFact: Drf_FH1 multi-domain protein 2.0e-17
Sma3: Glycine-rich protein 8.155e-17
coding
sp_v3.0_unigene22875 SustainPine v3.0 1723
AutoFact: proline-rich protein [Solanum tuberosum] 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Proline-rich protein 1.847e-14
Putative Complete
sp_v3.0_unigene24324 SustainPine v3.0 412
AutoFact: Drf_FH1 multi-domain protein 3.0e-15
Sma3: Glycine-rich protein 5.733e-12
coding
sp_v3.0_unigene27364 SustainPine v3.0 424
AutoFact: Drf_FH1 multi-domain protein 7.0e-36
Sma3: Extensin-like protein 1.735e-19
coding
sp_v3.0_unigene29458 SustainPine v3.0 1097
AutoFact: Gly_rich multi-domain protein 6.0e-19
Sma3: Glycine-rich protein 2.375e-19
coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain