Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: SWAP/Surp

Term: IPR000061  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene41690 SustainPine v3.0 123
AutoFact: G patch domain-containing protein 1 [Arabidopsis thaliana] dbj|BAC42755.1| unknown protein [Arabidopsis thaliana] gb|AAP40415.1| unknown protein [Arabidopsis thaliana] gb|AED93116.1| G patch domain-containing protein 1 [Arabidopsis thaliana] 3.0e-08
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene44485 SustainPine v3.0 624
AutoFact: G patch domain-containing protein 1 [Arabidopsis thaliana] dbj|BAC42755.1| unknown protein [Arabidopsis thaliana] gb|AAP40415.1| unknown protein [Arabidopsis thaliana] gb|AED93116.1| G patch domain-containing protein 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene47145 SustainPine v3.0 111
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene47195 SustainPine v3.0 231
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RE60_RICCO 2.0e-11
FL-Next: tr=RNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene47759 SustainPine v3.0 1072
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene56507 SustainPine v3.0 313
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene57127 SustainPine v3.0 381
AutoFact: putative U2-associated SR140 protein [Oryza sativa Japonica Group] 0.0
FL-Next: sp=SURP and G-patch domain-containing protein 1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene62158 SustainPine v3.0 248
AutoFact: putative U2-associated SR140 protein [Oryza sativa Japonica Group] 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene64203 SustainPine v3.0 224
AutoFact: putative U2-associated SR140 protein [Oryza sativa Japonica Group] 3.0e-31
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene69563 SustainPine v3.0 181
AutoFact: putative U2-associated SR140 protein [Oryza sativa Japonica Group] 5.0e-14
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene74596 SustainPine v3.0 334
AutoFact: arginine/serine rich splicing factor sf4/14, putative; K13096 splicing factor 4 8.0e-27
FL-Next: sp=SURP and G-patch domain-containing protein 1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Splicing factor 4-like protein 1.696e-09
Internal
sp_v3.0_unigene79785 SustainPine v3.0 332
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 5.0e-16
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene86311 SustainPine v3.0 236
AutoFact: spliceosome associated protein, putative; K12825 splicing factor 3A subunit 1 0.0001
coding
sp_v3.0_unigene93633 SustainPine v3.0 1412
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene99449 SustainPine v3.0 937
AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9HYM3_POPTR 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromatin remodeling complex subunit 1.22e-07
Internal
sp_v3.0_unigene99773 SustainPine v3.0 380
AutoFact: SWAP/Surp domain-containing protein [Arabidopsis thaliana] gb|AAK64161.1| unknown protein [Arabidopsis thaliana] gb|AAM20098.1| unknown protein [Arabidopsis thaliana] gb|AED96581.1| SWAP/Surp domain-containing protein [Arabidopsis thaliana] 9.0e-10
FL-Next: tr=Gene suppressor-of-white-apricot protein-like; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Os01g0698100 protein 8.285e-06
Internal
sp_v3.0_unigene99857 SustainPine v3.0 587
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 2.0e-28
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene101517 SustainPine v3.0 705
AutoFact: G patch domain-containing protein 1 [Arabidopsis thaliana] dbj|BAC42755.1| unknown protein [Arabidopsis thaliana] gb|AAP40415.1| unknown protein [Arabidopsis thaliana] gb|AED93116.1| G patch domain-containing protein 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene101766 SustainPine v3.0 255
AutoFact: [DKT] COG5035 Cell cycle control protein 7.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division control protein 50 1.968e-12
C-terminus
sp_v3.0_unigene102965 SustainPine v3.0 362
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain