Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
sp_v3.0_unigene203492
|
SustainPine v3.0
|
326
|
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ
|
3.0e-17
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
4.762e-09
|
|
C-terminus
|
sp_v3.0_unigene203507
|
SustainPine v3.0
|
573
|
• AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA
|
4.99997e-41
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Internal
|
sp_v3.0_unigene203508
|
SustainPine v3.0
|
520
|
• AutoFact: Putative gag-pol polyprotein n=1 Tax=Fragaria x ananassa RepID=C6GFP7_FRAAN
|
4.00001e-41
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.705e-07
|
|
Internal
|
sp_v3.0_unigene203633
|
SustainPine v3.0
|
548
|
• AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH
|
6.0e-33
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Internal
|
sp_v3.0_unigene203647
|
SustainPine v3.0
|
453
|
• AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH
|
5.0e-34
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Putative gag-pol polyprotein
|
1.584e-10
|
|
Internal
|
sp_v3.0_unigene203653
|
SustainPine v3.0
|
474
|
• AutoFact: 40S ribosomal protein S19-1 n=8 Tax=Arabidopsis RepID=RS191_ARATH
|
3.00004e-41
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: 40S ribosomal protein S19
|
3.212e-17
|
|
Putative Complete
|
sp_v3.0_unigene203659
|
SustainPine v3.0
|
394
|
• AutoFact: rve domain containing protein
|
9.0e-20
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
2.913e-16
|
|
Internal
|
sp_v3.0_unigene203681
|
SustainPine v3.0
|
364
|
• AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA
|
7.0e-29
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.874e-18
|
|
Internal
|
sp_v3.0_unigene203688
|
SustainPine v3.0
|
345
|
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q6I5H9_ORYSJ
|
1.0e-23
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Internal
|
sp_v3.0_unigene203747
|
SustainPine v3.0
|
474
|
• AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME
|
3.0e-29
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
2.131e-12
|
|
Internal
|
sp_v3.0_unigene203761
|
SustainPine v3.0
|
438
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
1.0e-32
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Copia-type polyprotein
|
6.348e-08
|
|
Internal
|
sp_v3.0_unigene203762
|
SustainPine v3.0
|
392
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
1.0e-24
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Internal
|
sp_v3.0_unigene203769
|
SustainPine v3.0
|
273
|
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC
|
5.0e-19
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Internal
|
sp_v3.0_unigene203773
|
SustainPine v3.0
|
686
|
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH
|
4.0e-32
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Putative C-terminus
|
sp_v3.0_unigene203785
|
SustainPine v3.0
|
438
|
• AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME
|
8.0e-25
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Gag-Pol polyprotein
|
5.742e-08
|
|
Internal
|
sp_v3.0_unigene203796
|
SustainPine v3.0
|
389
|
• AutoFact: Putative polyprotein n=1 Tax=Solanum lycopersicum RepID=Q5GA69_SOLLC
|
8.0e-22
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
9.317e-15
|
|
Internal
|
sp_v3.0_unigene203820
|
SustainPine v3.0
|
415
|
• AutoFact: rve domain containing protein
|
4.0e-11
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Copia-type polyprotein
|
3.753e-08
|
|
Internal
|
sp_v3.0_unigene203843
|
SustainPine v3.0
|
456
|
• AutoFact: rve domain containing protein
|
2.0e-07
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon Tto1 DNA
|
3.899e-06
|
|
Internal
|
sp_v3.0_unigene203844
|
SustainPine v3.0
|
363
|
• AutoFact: rve domain containing protein
|
1.0e-09
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Internal
|
sp_v3.0_unigene203897
|
SustainPine v3.0
|
459
|
• AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH
|
2.0e-18
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: HAT family dimerisation domain containing protein
|
9.517e-06
|
|
Internal
|