Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene13184 SustainPine v3.0 976
AutoFact: Laccase n=3 Tax=Pinus RepID=F4MKL7_PINPS 0.0
FL-Next: tr=Laccase; Pinus pinaster (Maritime pine). 0.0
Sma3: Laccase, putative 0.0
N-terminus
sp_v3.0_unigene13191 SustainPine v3.0 1633
AutoFact: PPPDE putative thiol peptidase family protein [Arabidopsis thaliana] ref|NP_973987.1| PPPDE putative thiol peptidase family protein [Arabidopsis thaliana] gb|AAL87252.1| unknown protein [Arabidopsis thaliana] gb|AAM45073.1| unknown protein [Arabidopsis th 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: EREBP-4 like protein 5.306e-19
Complete
sp_v3.0_unigene13217 SustainPine v3.0 1200
AutoFact: subtilisin-like proteinase-like [Oryza sativa Japonica Group] dbj|BAB90087.1| subtilisin-like proteinase-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Subtilisin-like protease 0.0
Putative C-terminus
sp_v3.0_unigene13239 SustainPine v3.0 815
AutoFact: Gag and Pol n=1 Tax=Zea mays RepID=Q8LSK0_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
N-terminus
sp_v3.0_unigene13248 SustainPine v3.0 1997
AutoFact: serine protease-like protein [Nicotiana tabacum] 0.0
FL-Next: tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Xylem serine proteinase 1, putative 8.15556e-43
C-terminus
sp_v3.0_unigene13427 SustainPine v3.0 911
AutoFact: Glutamate receptor n=1 Tax=Populus trichocarpa RepID=B9HPN5_POPTR 0.0
FL-Next: sp=Glutamate receptor 3.4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 0.0
Internal
sp_v3.0_unigene13515 SustainPine v3.0 1401
AutoFact: [I] COG1022 Long-chain acyl-CoA synthetases (AMP-forming) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Acyl-CoA synthetase-like protein 5.087e-09
Complete
sp_v3.0_unigene13573 SustainPine v3.0 886
AutoFact: RecName: Full=Pleiotropic drug resistance protein 4 emb|CAD59569.1| PDR-like ABC transporter [Oryza sativa Japonica Group] tpg|DAA00887.1| TPA_exp: PDR4 ABC transporter [Oryza sativa (japonica cultivar-group)] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-binding cassette transporter, putative 0.0
N-terminus
sp_v3.0_unigene13613 SustainPine v3.0 2868
AutoFact: Putative Sas10/Utp3 family protein, identical [Solanum demissum] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene13656 SustainPine v3.0 842
AutoFact: putative protein phosphatase 2C 8 [Arabidopsis thaliana] sp|Q9LMT1.2|P2C08_ARATH RecName: Full=Probable protein phosphatase 2C 8; Short=AtPP2C08 gb|ABG48379.1| At1g18030 [Arabidopsis thaliana] gb|AEE29665.1| putative protein phosphatase 2C 8 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene13742 SustainPine v3.0 1819
AutoFact: peroxin 10 [Arabidopsis thaliana] sp|Q9SYU4.1|PEX10_ARATH RecName: Full=Peroxisome biogenesis factor 10; AltName: Full=PER10; AltName: Full=Peroxin-10; AltName: Full=Peroxisomal biogenesis factor 10; Short=AtPEX10; Short=AthPEX10; AltName: Full=Peroxisome 0.0
FL-Next: sp=Peroxisome biogenesis factor 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Peroxisome biogenesis factor 10 4.688e-09
Complete
sp_v3.0_unigene13833 SustainPine v3.0 1021
AutoFact: rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] gb|AAB60741.1| F21M12.27 gene product [Arabidopsis thaliana] gb|AEE28510.1| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lyase, putative 2.395e-27
Putative N-terminus
sp_v3.0_unigene13903 SustainPine v3.0 662
AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 0.0
FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
Sma3: 5'->3' exoribonuclease, putative 6.254e-16
Internal
sp_v3.0_unigene13912 SustainPine v3.0 860
AutoFact: Subtilisin-like serine protease n=5 Tax=Arabidopsis RepID=Q8LGA0_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Subtilisin-like protease 7.012e-40
Internal
sp_v3.0_unigene14290 SustainPine v3.0 530
AutoFact: Putative ripening regulated protein [Oryza sativa Japonica Group] gb|ABF94378.1| MatE family protein, expressed [Oryza sativa Japonica Group] 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 1.96182e-44
C-terminus
sp_v3.0_unigene14309 SustainPine v3.0 726
AutoFact: LOB domain protein 1, putative [Solanum demissum] 5.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr13 scaffold_17, whole genome shotgun sequence 1.811e-14
Complete
sp_v3.0_unigene14334 SustainPine v3.0 517
AutoFact: helicase associated domain-containing protein [Arabidopsis thaliana] gb|AAK96883.1| ATP-dependent RNA helicase, putative [Arabidopsis thaliana] gb|AAM91118.1| ATP-dependent RNA helicase, putative [Arabidopsis thaliana] gb|AEE30889.1| helicase associated d 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 9.009e-07
Internal
sp_v3.0_unigene14403 SustainPine v3.0 643
AutoFact: serine/threonine-protein kinase Nek5 [Arabidopsis thaliana] sp|Q0WPH8.1|NEK5_ARATH RecName: Full=Serine/threonine-protein kinase Nek5; AltName: Full=NimA-related protein kinase 5; Short=AtNEK6; Short=AtNek5 dbj|BAF00971.1| protein kinase like protein [Ara 4.0e-28
FL-Next: sp=Serine/threonine-protein kinase Nek5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Serine/threonine-protein kinase Nek4 2.513e-11
N-terminus
sp_v3.0_unigene14595 SustainPine v3.0 1488
AutoFact: Multidrug resistance protein ABC transporter family (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MWQ7_POPTR 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug resistance protein ABC transporter family 0.0
C-terminus
sp_v3.0_unigene14974 SustainPine v3.0 533
AutoFact: calcium-binding EF-hand domain-containing protein [Arabidopsis thaliana] gb|AAM20402.1| unknown protein [Arabidopsis thaliana] gb|AEE32908.1| calcium-binding EF-hand domain-containing protein [Arabidopsis thaliana] 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Calcium ion binding protein, putative 1.259e-09
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain