Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, H2C2-type, histone UAS binding

Term: IPR015416  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene57010 SustainPine v3.0 294
• AutoFact: Gag-pol polyprotein n=3 Tax=Zea mays RepID=Q8L7J3_MAIZE 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.902e-10
N-terminus
sp_v3.0_unigene57083 SustainPine v3.0 281
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2R3G0_ORYSJ 5.0e-14
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.252e-12
Internal
sp_v3.0_unigene57171 SustainPine v3.0 330
• AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD5_SILLA 1.0e-15
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Internal
sp_v3.0_unigene57503 SustainPine v3.0 356
• AutoFact: gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis thaliana] dbj|BAB03109.1| retroelement pol polyprotein [Arabidopsis thaliana] 9.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 4.256e-23
Putative Complete
sp_v3.0_unigene57529 SustainPine v3.0 478
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XCD6_ORYSJ 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.085e-24
Putative Complete
sp_v3.0_unigene57546 SustainPine v3.0 247
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2R2N6_ORYSJ 5.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.329e-12
Putative Complete
sp_v3.0_unigene57575 SustainPine v3.0 371
• AutoFact: rve domain containing protein 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Gag-Pol polyprotein 1.54e-12
Internal
sp_v3.0_unigene57577 SustainPine v3.0 191
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 5.562e-08
C-terminus
sp_v3.0_unigene57616 SustainPine v3.0 221
• AutoFact: OSJNBa0070D17.9 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XLT9_ORYSJ 7.0e-13
• FL-Next: tr=OSJNBa0070D17.9 protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene57649 SustainPine v3.0 370
• AutoFact: Putative gag-pol polyprotein, identical n=2 Tax=Solanum demissum RepID=Q5NRP4_SOLDE 6.0e-26
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Putative N-terminus
sp_v3.0_unigene57652 SustainPine v3.0 381
• AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 3.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gag-Pol polyprotein 4.711e-11
Complete
sp_v3.0_unigene57679 SustainPine v3.0 232
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 2.0e-25
• FL-Next: tr=Putative retroelement pol polyprotein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene57727 SustainPine v3.0 449
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q10PF2_ORYSJ 1.0e-37
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Polyprotein 4.833e-15
Putative C-terminus
sp_v3.0_unigene58022 SustainPine v3.0 402
• AutoFact: Integrase (Fragment) n=1 Tax=Gossypium herbaceum RepID=Q7XYU4_GOSHE 1.0e-21
• FL-Next: tr=Putative uncharacterized protein orf215; Nicotiana tabacum (Common tobacco). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 9.156e-30
C-terminus
sp_v3.0_unigene58036 SustainPine v3.0 372
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 7.0e-36
• FL-Next: tr=Polyprotein; Primula vulgaris. 0.0
• Sma3: Pol protein integrase region 1.636e-18
Internal
sp_v3.0_unigene58048 SustainPine v3.0 170
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative retroelement pol polyprotein 8.764e-10
Putative N-terminus
sp_v3.0_unigene58065 SustainPine v3.0 322
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene58191 SustainPine v3.0 311
• AutoFact: Putative gag-pol polyprotein n=1 Tax=Triticum monococcum subsp. aegilopoides RepID=B5G4Y0_TRIMO 2.0e-26
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 7.399e-27
C-terminus
sp_v3.0_unigene58298 SustainPine v3.0 222
• AutoFact: [L] COG2801 Transposase and inactivated derivatives 4.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.012e-15
Putative Complete
sp_v3.0_unigene58346 SustainPine v3.0 310
• AutoFact: Putative gag-pol polyprotein, identical [Solanum demissum] 8.0e-30
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.75e-25
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain