Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, H2C2-type, histone UAS binding

Term: IPR015416  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene55929 SustainPine v3.0 102
AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 4.0e-09
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 0.0
Internal
sp_v3.0_unigene55948 SustainPine v3.0 156
AutoFact: Putative gag-pol polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FW76_ORYSJ 2.0e-10
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Internal
sp_v3.0_unigene55977 SustainPine v3.0 388
AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene56001 SustainPine v3.0 307
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QZS5_ORYSJ 1.0e-14
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Pol protein integrase region 2.051e-40
Internal
sp_v3.0_unigene56014 SustainPine v3.0 460
AutoFact: reverse transcriptase [Taxus baccata] 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Putative Complete
sp_v3.0_unigene56141 SustainPine v3.0 474
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 7.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 5.699e-27
Putative Complete
sp_v3.0_unigene56267 SustainPine v3.0 340
AutoFact: Os09g0491900 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q0J0N1_ORYSJ 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 1.204e-11
C-terminus
sp_v3.0_unigene56377 SustainPine v3.0 386
AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 6.0e-38
FL-Next: tr=Integrase core domain containing protein; Asparagus officinalis (Garden asparagus). 0.0
Sma3: Gag-Pol polyprotein 3.525e-11
Internal
sp_v3.0_unigene56380 SustainPine v3.0 413
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 2.0e-30
FL-Next: tr=Polyprotein; Primula vulgaris. 0.0
Internal
sp_v3.0_unigene56411 SustainPine v3.0 263
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q56GG4_CYCRE 2.0e-20
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 2.223e-23
Internal
sp_v3.0_unigene56506 SustainPine v3.0 516
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SQW9_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.365e-29
Putative Complete
sp_v3.0_unigene56519 SustainPine v3.0 261
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.134e-13
Putative Complete
sp_v3.0_unigene56571 SustainPine v3.0 397
AutoFact: Putative retroelement integrase n=1 Tax=Arabidopsis thaliana RepID=Q8S8M1_ARATH 5.0e-35
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.436e-26
C-terminus
sp_v3.0_unigene56575 SustainPine v3.0 143
AutoFact: Putative polyprotein n=2 Tax=Oryza sativa Japonica Group RepID=Q7Y1L5_ORYSJ 2.0e-12
FL-Next: tr=Putative polyprotein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene56794 SustainPine v3.0 414
AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD5_SILLA 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 5.965e-09
Putative Complete
sp_v3.0_unigene56835 SustainPine v3.0 297
AutoFact: PREDICTED: similar to polyprotein n=1 Tax=Vitis vinifera RepID=UPI0001983558 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 9.142e-29
Internal
sp_v3.0_unigene56879 SustainPine v3.0 211
AutoFact: Unassigned protein
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Pol protein integrase region 1.324e-30
Internal
sp_v3.0_unigene56924 SustainPine v3.0 344
AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QSS9_ORYSJ 2.0e-18
FL-Next: tr=OSIGBa0096I22.1 protein; Oryza sativa (Rice). 0.0
Internal
sp_v3.0_unigene56985 SustainPine v3.0 364
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ 6.0e-35
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Polyprotein 6.344e-19
Putative N-terminus
sp_v3.0_unigene56993 SustainPine v3.0 475
AutoFact: OSJNBa0053B21.11 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XKR0_ORYSJ 3.0e-27
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 4.153e-11
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain