Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, H2C2-type, histone UAS binding

Term: IPR015416  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene165811 SustainPine v3.0 407
• AutoFact: OSIGBa0118P15.5 protein n=1 Tax=Oryza sativa RepID=Q01KK6_ORYSA 4.0e-22
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene166312 SustainPine v3.0 333
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 5.983e-39
Internal
sp_v3.0_unigene166617 SustainPine v3.0 494
• AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gag-Pol polyprotein 4.92e-11
C-terminus
sp_v3.0_unigene166626 SustainPine v3.0 193
• AutoFact: Putative polyprotein n=1 Tax=Zea mays RepID=Q8SA93_MAIZE 2.0e-18
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, unclassified 7.858e-20
Putative C-terminus
sp_v3.0_unigene167226 SustainPine v3.0 218
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 5.0e-17
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene167370 SustainPine v3.0 239
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 6.289e-40
Putative Complete
sp_v3.0_unigene167447 SustainPine v3.0 235
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 2.0e-18
• FL-Next: tr=Polyprotein; Primula vulgaris. 0.0
Internal
sp_v3.0_unigene167733 SustainPine v3.0 276
• AutoFact: Unassigned protein
• FL-Next: tr=Os08g0273000 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Polyprotein 8.404e-07
Putative C-terminus
sp_v3.0_unigene167882 SustainPine v3.0 165
• AutoFact: Pol protein (Fragment) n=2 Tax=Picea abies RepID=Q9M6P0_PICAB 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein 1.852e-08
Internal
sp_v3.0_unigene167908 SustainPine v3.0 300
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 4.0e-24
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 6.177e-38
Internal
sp_v3.0_unigene167934 SustainPine v3.0 264
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=16 Tax=Magnoliophyta RepID=Q7XG23_ORYSJ 6.0e-19
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Gag-Pol polyprotein 5.352e-08
Putative C-terminus
sp_v3.0_unigene167998 SustainPine v3.0 205
• AutoFact: Pol protein integrase region (Fragment) n=1 Tax=Pinus brutia RepID=Q9M6N4_9CONI 5.0e-22
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene168023 SustainPine v3.0 360
• AutoFact: Putative integrase (Fragment) n=7 Tax=Cucumis melo RepID=B0B0F4_CUCME 5.0e-25
• FL-Next: tr=Putative uncharacterized protein; Beta vulgaris (Sugar beet). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.604e-10
Internal
sp_v3.0_unigene183383 SustainPine v3.0 476
• AutoFact: Protein dimerization, putative n=1 Tax=Ricinus communis RepID=B9SWK8_RICCO 2.0e-24
• FL-Next: tr=Protein dimerization, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene183452 SustainPine v3.0 597
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Poaceae RepID=Q2QUR6_ORYSJ 0.0
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.833e-30
C-terminus
sp_v3.0_unigene185359 SustainPine v3.0 599
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.416e-08
Internal
sp_v3.0_unigene186261 SustainPine v3.0 353
• AutoFact: retrotransposable element Tf2 155 kDa protein type 1-like 9.0e-28
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.609e-15
Internal
sp_v3.0_unigene186908 SustainPine v3.0 466
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 9.7e-21
Putative Complete
sp_v3.0_unigene187222 SustainPine v3.0 507
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago truncatula RepID=A2Q2C7_MEDTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.47105e-41
Putative Complete
sp_v3.0_unigene187353 SustainPine v3.0 274
• AutoFact: Unassigned protein
• FL-Next: tr=RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 9.658e-23
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain