Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, H2C2-type, histone UAS binding

Term: IPR015416  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene163996 SustainPine v3.0 295
• AutoFact: Reverse transcriptase (Fragment) n=4 Tax=Eleocharis RepID=D5LVM5_9POAL 8.0e-26
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 5.1848e-44
Putative C-terminus
sp_v3.0_unigene164149 SustainPine v3.0 360
• AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gag-Pol polyprotein 2.25e-08
Putative Complete
sp_v3.0_unigene164200 SustainPine v3.0 224
• AutoFact: Reverse transcriptase (Fragment) n=3 Tax=Eleocharis cellulosa RepID=D5LVM7_9POAL 3.0e-15
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 2.048e-10
Internal
sp_v3.0_unigene164221 SustainPine v3.0 338
• AutoFact: Putative retroelement n=1 Tax=Oryza sativa RepID=Q8S6I8_ORYSA 5.0e-16
• FL-Next: tr=Putative retroelement; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene164394 SustainPine v3.0 360
• AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD4_SILLA 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Gag-Pol polyprotein 3.07e-09
Internal
sp_v3.0_unigene164410 SustainPine v3.0 370
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ 1.0e-27
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Pol protein integrase region 8.42e-25
Internal
sp_v3.0_unigene164458 SustainPine v3.0 312
• AutoFact: rve domain containing protein 8.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.261e-40
Putative Complete
sp_v3.0_unigene164525 SustainPine v3.0 280
• AutoFact: Os10g0317000 protein n=2 Tax=Oryza sativa RepID=Q7XFZ5_ORYSJ 6.0e-28
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, unclassified 2.823e-12
Putative N-terminus
sp_v3.0_unigene164548 SustainPine v3.0 218
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SQW9_ARATH 7.0e-19
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 1.892e-18
Putative C-terminus
sp_v3.0_unigene164601 SustainPine v3.0 422
• AutoFact: Unassigned protein
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 3.087e-17
Putative C-terminus
sp_v3.0_unigene164641 SustainPine v3.0 207
• AutoFact: OSIGBa0111L12.7 protein n=1 Tax=Oryza sativa RepID=Q01IZ5_ORYSA 5.0e-16
• FL-Next: tr=OSIGBa0111L12.7 protein; Oryza sativa (Rice). 0.0
• Sma3: Polyprotein 8.129e-07
Internal
sp_v3.0_unigene164730 SustainPine v3.0 178
• AutoFact: Reverse transcriptase (Fragment) n=2 Tax=Sciadopitys verticillata RepID=Q56GF7_SCIVE 3.0e-20
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 0.0
Internal
sp_v3.0_unigene164779 SustainPine v3.0 229
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ 7.0e-16
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Putative retroelement 1.819e-08
Internal
sp_v3.0_unigene164796 SustainPine v3.0 387
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 2.0e-32
• FL-Next: tr=Gypsy/Ty-3 retroelement polyprotein; 69905-74404; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 6.797e-06
Internal
sp_v3.0_unigene165002 SustainPine v3.0 127
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Taxus baccata RepID=Q56GF5_TAXBA 2.0e-11
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Internal
sp_v3.0_unigene165034 SustainPine v3.0 242
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 3.0e-18
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.7236e-43
Internal
sp_v3.0_unigene165130 SustainPine v3.0 228
• AutoFact: OSJNBa0035O13.13 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XSL7_ORYSJ 4.0e-16
• FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.657e-22
Putative N-terminus
sp_v3.0_unigene165328 SustainPine v3.0 305
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 7.0e-18
• FL-Next: tr=Putative uncharacterized protein P0001A07.10; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 9.764e-06
Internal
sp_v3.0_unigene165514 SustainPine v3.0 344
• AutoFact: rve domain containing protein 4.0e-09
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Gag-Pol polyprotein 3.67e-09
Internal
sp_v3.0_unigene165584 SustainPine v3.0 349
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 5.0e-30
• FL-Next: tr=Polyprotein; Primula vulgaris. 0.0
• Sma3: Pol protein integrase region 6.854e-25
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain