Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, H2C2-type, histone UAS binding

Term: IPR015416  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene161256 SustainPine v3.0 488
• AutoFact: Unassigned protein
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Polyprotein 1.524e-13
C-terminus
sp_v3.0_unigene161420 SustainPine v3.0 503
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=7 Tax=Poaceae RepID=Q10IG2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.788e-32
Putative Complete
sp_v3.0_unigene161510 SustainPine v3.0 482
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 2.8026e-45
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.467e-17
C-terminus
sp_v3.0_unigene161533 SustainPine v3.0 355
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 5.0e-29
• FL-Next: tr=Polyprotein; Primula vulgaris. 0.0
• Sma3: Pol protein integrase region 1.429e-35
Internal
sp_v3.0_unigene161632 SustainPine v3.0 403
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
• Sma3: Gag-Pol polyprotein 8.813e-10
Internal
sp_v3.0_unigene161664 SustainPine v3.0 349
• AutoFact: putative polyprotein [Zea mays] 1.0e-33
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 5.345e-38
C-terminus
sp_v3.0_unigene161725 SustainPine v3.0 216
• AutoFact: Retrotransposon protein, putative, unclassified n=3 Tax=Oryza sativa Japonica Group RepID=Q2R6F1_ORYSJ 2.0e-17
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative C-terminus
sp_v3.0_unigene161749 SustainPine v3.0 373
• AutoFact: OSJNBa0054D14.1 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XW39_ORYSJ 5.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 7.999e-26
Putative Complete
sp_v3.0_unigene161753 SustainPine v3.0 356
• AutoFact: Putative polyprotein n=1 Tax=Zea mays RepID=Q8SA93_MAIZE 2.0e-38
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.127e-20
C-terminus
sp_v3.0_unigene161764 SustainPine v3.0 438
• AutoFact: PREDICTED: similar to polyprotein n=1 Tax=Vitis vinifera RepID=UPI0001983558 7.0e-35
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.151e-18
C-terminus
sp_v3.0_unigene161770 SustainPine v3.0 378
• AutoFact: Putative gag-pol polyprotein n=1 Tax=Petunia x hybrida RepID=Q6VPE8_PETHY 2.0e-24
• FL-Next: tr=Putative gag-pol polyprotein; Petunia hybrida (Petunia). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy sub-class 4.077e-10
Internal
sp_v3.0_unigene161819 SustainPine v3.0 347
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SL06_ARATH 1.0e-18
• FL-Next: tr=Putative uncharacterized protein OSJNBa0042F15.18; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene161820 SustainPine v3.0 253
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ 2.0e-22
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 7.698e-13
Putative C-terminus
sp_v3.0_unigene161968 SustainPine v3.0 407
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 9.0e-23
• FL-Next: tr=Putative uncharacterized protein; Beta vulgaris (Sugar beet). 0.0
Internal
sp_v3.0_unigene162249 SustainPine v3.0 224
• AutoFact: Os10g0317000 protein n=2 Tax=Oryza sativa RepID=Q7XFZ5_ORYSJ 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 4.021e-24
Putative Complete
sp_v3.0_unigene162252 SustainPine v3.0 296
• AutoFact: polyprotein [Glycine max] 1.0e-19
• FL-Next: tr=Disease resistance protein; pekinensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 4.516e-19
Internal
sp_v3.0_unigene162374 SustainPine v3.0 396
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus radiata RepID=Q56GF9_PINRA 3.0e-24
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 3.319e-18
Putative N-terminus
sp_v3.0_unigene162476 SustainPine v3.0 332
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ 7.0e-29
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.895e-32
N-terminus
sp_v3.0_unigene162529 SustainPine v3.0 477
• AutoFact: F5K24.7 protein n=1 Tax=Arabidopsis thaliana RepID=Q9ZPG1_ARATH 3.0e-33
• FL-Next: tr=F5K24.7 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.215e-38
Internal
sp_v3.0_unigene162611 SustainPine v3.0 387
• AutoFact: rve domain containing protein 9.0e-12
• FL-Next: tr=Putative uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.839e-16
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain